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Medrxiv : the Preprint Server for Health Sciences|September 15, 2025
Comparison of phylogenetic metrics of transmission in symptomatic and asymptomatic tuberculosisKesia Esther Da Silva, Paulo César Pereira Dos Santos, Daniel Henrique Tsuha, et al.
The Lancet. Microbe|July 2, 2026
Lineage-specific transmission and spatial clustering of Mycobacterium tuberculosis in Kaohsiung, Taiwan, in 2019-23: a population-based genomic studyChieh-Yin Wu, Ying-An Chen, Thomas R Ioerger, et al.
Npj Viruses|April 28, 2025
Inferring enterovirus D68 transmission dynamics from the genomic data of two 2022 North American outbreaksMartin Grunnill, Alireza Eshaghi, Lambodhar Damodaran, et al.
BMC Infectious Diseases|December 1, 2019
Mathematical modelling for antibiotic resistance control policy: do we know enough?Gwenan M Knight, Nicholas G Davies, Caroline Colijn, et al.
Plos Medicine|February 22, 2022
Phylogeography and transmission of M. tuberculosis in Moldova: A prospective genomic analysisChongguang Yang, Benjamin Sobkowiak, Vijay Naidu, et al.
Epidemics|June 15, 2014
OutbreakTools: a new platform for disease outbreak analysis using the R softwareThibaut Jombart, David M Aanensen, Marc Baguelin, et al.
Molecular Biology and Evolution|January 6, 2017
Phylogenetic Tools for Generalized HIV-1 Epidemics: Findings from the PANGEA-HIV Methods ComparisonOliver Ratmann, Emma B Hodcroft, Michael Pickles, et al.
Lancet Regional Health. Americas|June 1, 2022
The role of prisons in disseminating tuberculosis in Brazil: A genomic epidemiology studyKatharine S Walter, Paulo César Pereira Dos Santos, Thais Oliveira Gonçalves, et al.
Mbio|May 7, 2016
Whole-Genome Sequencing for Routine Pathogen Surveillance in Public Health: a Population Snapshot of Invasive Staphylococcus aureus in EuropeDavid M Aanensen, Edward J Feil, Matthew T G Holden, et al.
Canada Communicable Disease Report = Releve Des Maladies Transmissibles Au Canada|October 9, 2024
Mathematical modelling for pandemic preparedness in Canada: Learning from COVID-19Nicholas H Ogden, Emily S Acheson, Kevin Brown, et al.
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