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Nature Communications|November 26, 2025
Defining the role of β-cell IRE1α/XBP1 pathway and its gene regulatory network components in non-obese diabetic miceHugo Lee, Khagani Eynullazada, Qiaodan Ou, et al.Chronobiology International|December 14, 2007
Alterations of the characteristics of the circadian rest-activity rhythm of cancer in-patientsAtanu Kumar Pati, Arti Parganiha, Anjana Kar, et al.Cancer Research|January 21, 2018
Integrative Genomic Analysis Predicts Causative <i>Cis</i>-Regulatory Mechanisms of the Breast Cancer-Associated Genetic Variant rs4415084Yi Zhang, Mohith Manjunath, Shilu Zhang, et al.Frontiers in Genetics|August 9, 2020
ABC-GWAS: Functional Annotation of Estrogen Receptor-Positive Breast Cancer Genetic VariantsMohith Manjunath, Yi Zhang, Shilu Zhang, et al.Plos Computational Biology|October 23, 2013
Integrated module and gene-specific regulatory inference implicates upstream signaling networksSushmita Roy, Stephen Lagree, Zhonggang Hou, et al.Genome Biology|March 2, 2006
Release of extraction-resistant mRNA in stationary phase Saccharomyces cerevisiae produces a massive increase in transcript abundance in response to stressAnthony D Aragon, Gabriel A Quiñones, Edward V Thomas, et al.Omics : a Journal of Integrative Biology|April 16, 2023
Identification of Common Dysregulated Genes in COVID-19 and Hypersensitivity Pneumonitis: A Systems Biology and Machine Learning ApproachSanjukta Dasgupta, Sankha Subhra Das, Sankalp Patidar, et al.Journal of Immunology and Regenerative Medicine|February 10, 2021
Cardiac fibroblast derived matrix-educated macrophages express VEGF and IL-6, and recruit mesenchymal stromal cellsSushmita Roy, Keith Spinali, Eric G Schmuck, et al.Biorxiv : the Preprint Server for Biology|July 15, 2025
Uncovering Functional Gene Regulatory Networks in Bulk and Single-Cell Data through Robust Transcription Factor Activity Estimation and Model-Guided Experimental ValidationAlireza Fotuhi Siahpirani, Sunnie Grace McCalla, Saptarshi Pyne, et al.Lung India : Official Organ of Indian Chest Society|January 28, 2015
Role of doxycycline to resolve different types of non-malignant lung and pleural pathology: The results of a pilot observationParthasarathi Bhattacharyya, Rana Dey, Dipanjan Saha, et al.Pageof 13