Da-Inn Lee|Sushmita Roy - JoVE Visualize

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Bioinformatics Advances|July 8, 2025

Perspective on recent developments and challenges in regulatory and systems genomicsJulia Zeitlinger, Sushmita Roy, Ferhat Ay, et al.

Cytotherapy|November 6, 2023

Human left ventricular cardiac fibroblasts undergo a dynamic shift in secretome and gene expression toward a cardiac myofibroblast phenotype during early passage in typical culture expansion conditionsEric G Schmuck, Sushmita Roy, Tianhua Zhou, et al.

Genome Research|March 30, 2012

Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networksDaniel Marbach, Sushmita Roy, Ferhat Ay, et al.

G3 (Bethesda, Md.)|January 10, 2023

Identifying strengths and weaknesses of methods for computational network inference from single-cell RNA-seq dataSunnie Grace McCalla, Alireza Fotuhi Siahpirani, Jiaxin Li, et al.

Cell Reports|December 5, 2019

Metabolic Rewiring in Response to Biguanides Is Mediated by mROS/HIF-1a in Malignant LymphocytesHamidullah Khan, Ashish Anshu, Aman Prasad, et al.

Nature Communications|May 27, 2023

Inference of cell type-specific gene regulatory networks on cell lineages from single cell omic datasetsShilu Zhang, Saptarshi Pyne, Stefan Pietrzak, et al.

F1000Research|March 13, 2018

Evaluation of antibiotic susceptibility in wound infections: A pilot study from BangladeshSushmita Roy, Mejbah Uddin Ahmed, Bhuiyan Mohammad Mahtab Uddin, et al.

Plos Computational Biology|July 10, 2023

Leveraging epigenomes and three-dimensional genome organization for interpreting regulatory variationBrittany Baur, Junha Shin, Jacob Schreiber, et al.

Genome Research|May 4, 2013

Arboretum: reconstruction and analysis of the evolutionary history of condition-specific transcriptional modulesSushmita Roy, Ilan Wapinski, Jenna Pfiffner, et al.

Nature Communications|February 5, 2015

Collaborative rewiring of the pluripotency network by chromatin and signalling modulating pathwaysKhoa A Tran, Steven A Jackson, Zachariah P G Olufs, et al.

Pageof 13

Showing results (61-70 of 121) with videos related to

Sort By:

Pageof 13

Bioinformatics Advances|July 8, 2025

Perspective on recent developments and challenges in regulatory and systems genomicsJulia Zeitlinger, Sushmita Roy, Ferhat Ay, et al.

Cytotherapy|November 6, 2023

Human left ventricular cardiac fibroblasts undergo a dynamic shift in secretome and gene expression toward a cardiac myofibroblast phenotype during early passage in typical culture expansion conditionsEric G Schmuck, Sushmita Roy, Tianhua Zhou, et al.

Genome Research|March 30, 2012

Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networksDaniel Marbach, Sushmita Roy, Ferhat Ay, et al.

G3 (Bethesda, Md.)|January 10, 2023

Identifying strengths and weaknesses of methods for computational network inference from single-cell RNA-seq dataSunnie Grace McCalla, Alireza Fotuhi Siahpirani, Jiaxin Li, et al.

Cell Reports|December 5, 2019

Metabolic Rewiring in Response to Biguanides Is Mediated by mROS/HIF-1a in Malignant LymphocytesHamidullah Khan, Ashish Anshu, Aman Prasad, et al.

Nature Communications|May 27, 2023

Inference of cell type-specific gene regulatory networks on cell lineages from single cell omic datasetsShilu Zhang, Saptarshi Pyne, Stefan Pietrzak, et al.

F1000Research|March 13, 2018

Evaluation of antibiotic susceptibility in wound infections: A pilot study from BangladeshSushmita Roy, Mejbah Uddin Ahmed, Bhuiyan Mohammad Mahtab Uddin, et al.

Plos Computational Biology|July 10, 2023

Leveraging epigenomes and three-dimensional genome organization for interpreting regulatory variationBrittany Baur, Junha Shin, Jacob Schreiber, et al.

Genome Research|May 4, 2013

Arboretum: reconstruction and analysis of the evolutionary history of condition-specific transcriptional modulesSushmita Roy, Ilan Wapinski, Jenna Pfiffner, et al.

Nature Communications|February 5, 2015

Collaborative rewiring of the pluripotency network by chromatin and signalling modulating pathwaysKhoa A Tran, Steven A Jackson, Zachariah P G Olufs, et al.

Pageof 13