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Biorxiv : the Preprint Server for Biology|June 4, 2025
An AI-Guided Framework Reveals Conserved Features Governing microRNA Strand SelectionDalton Meadows, Hailee Hargis, Amanda Ellis, et al.Nucleic Acids Research|January 14, 2026
An AI-guided framework reveals conserved features governing microRNA strand selectionDalton Meadows, Hailee Hargis, Amanda Ellis, et al.Nucleic Acids Research|June 25, 2024
A comprehensive analysis of 3'UTRs in Caenorhabditis elegansEmma Murari, Dalton Meadows, Nicholas Cuda, et al.Biorxiv : the Preprint Server for Biology|February 26, 2024
A Comprehensive Analysis of 3-UTRs in Caenorhabditis elegansEmma Murari, Dalton Meadows, Nicholas Cuda, et al.Genome Biology|February 9, 2018
Kourami: graph-guided assembly for novel human leukocyte antigen allele discoveryHeewook Lee, Carl KingsfordMethods in Molecular Biology (Clifton, N.J.)|March 13, 2012
Next-generation sequencing technologies and fragment assembly algorithmsHeewook Lee, Haixu TangMethods in Molecular Biology (Clifton, N.J.)|June 3, 2018
Accurate Assembly and Typing of HLA using a Graph-Guided Assembler KouramiHeewook Lee, Carl KingsfordBiorxiv : the Preprint Server for Biology|February 20, 2025
Self-Contemplating In-Context Learning Enhances T Cell Receptor Generation for Novel EpitopesPengfei Zhang, Seojin Bang, Heewook LeePacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|December 21, 2022
PiTE: TCR-epitope Binding Affinity Prediction Pipeline using Transformer-based Sequence EncoderPengfei Zhang, Seojin Bang, Heewook LeeInternational Journal of Molecular Sciences|November 13, 2021
miRNA-Based Regulation of Alternative RNA Splicing in MetazoansAnna L Schorr, Marco MangonePageof 8