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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|May 9, 2022
Data Set-Adaptive Minimizer Order Reduces Memory Usage in k-Mer CountingDan Flomin, David Pellow, Ron ShamirPlos Computational Biology|October 28, 2022
Parameterized syncmer schemes improve long-read mappingAbhinav Dutta, David Pellow, Ron ShamirPlos Computational Biology|April 4, 2020
PlasClass improves plasmid sequence classificationDavid Pellow, Itzik Mizrahi, Ron ShamirPlos Computational Biology|October 3, 2017
Designing small universal k-mer hitting sets for improved analysis of high-throughput sequencingYaron Orenstein, David Pellow, Guillaume Marçais, et al.Bioinformatics (Oxford, England)|September 9, 2017
Improving the performance of minimizers and winnowing schemesGuillaume Marçais, David Pellow, Daniel Bork, et al.Genome Research|August 9, 2023
Efficient minimizer orders for large values of k using minimum decycling setsDavid Pellow, Lianrong Pu, Bariş Ekim, et al.Microbiome|June 26, 2021
SCAPP: an algorithm for improved plasmid assembly in metagenomesDavid Pellow, Alvah Zorea, Maraike Probst, et al.Nature Communications|April 11, 2024
Plasmids in the human gut reveal neutral dispersal and recombination that is overpowered by inflammatory diseasesAlvah Zorea, David Pellow, Liron Levin, et al.Microbiome|December 2, 2025
ProFiT-SPEci-FISH: a novel approach for linking plasmids to hosts in complex microbial communities at the single-cell levelAlvah Zorea, Sarah Moraïs, David Pellow, et al.Nature Reviews. Molecular Cell Biology|September 18, 2008
Modelling and analysis of gene regulatory networksGuy Karlebach, Ron ShamirPageof 20