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Nucleic Acids Research|September 24, 2013
A general approach for discriminative de novo motif discovery from high-throughput dataJan Grau, Stefan Posch, Ivo Grosse, et al.
Frontiers in Bioengineering and Biotechnology|October 7, 2015
Joint Analysis of Dependent Features within Compound Spectra Can Improve Detection of Differential FeaturesDiana Trutschel, Stephan Schmidt, Ivo Grosse, et al.
BMC Bioinformatics|March 3, 2017
Combining phylogenetic footprinting with motif models incorporating intra-motif dependenciesMartin Nettling, Hendrik Treutler, Jesus Cerquides, et al.
BMC Bioinformatics|June 7, 2003
Poly: a quantitative analysis tool for simple sequence repeat (SSR) tracts in DNAJeff W Bizzaro, Kenneth A Marx
Bioinformatics (Oxford, England)|January 29, 2017
Unrealistic phylogenetic trees may improve phylogenetic footprintingMartin Nettling, Hendrik Treutler, Jesus Cerquides, et al.
BMC Bioinformatics|February 6, 2014
DRUMS: Disk Repository with Update Management and Select option for high throughput sequencing dataMartin Nettling, Nils Thieme, Andreas Both, et al.
Plos Computational Biology|January 19, 2012
Parsimonious higher-order hidden Markov models for improved array-CGH analysis with applications to Arabidopsis thalianaMichael Seifert, André Gohr, Marc Strickert, et al.
Bioinformatics (Oxford, England)|April 23, 2011
Exploiting prior knowledge and gene distances in the analysis of tumor expression profiles with extended Hidden Markov ModelsMichael Seifert, Marc Strickert, Alexander Schliep, et al.
Bioinformatics (Oxford, England)|April 30, 2009
Utilizing gene pair orientations for HMM-based analysis of promoter array ChIP-chip dataMichael Seifert, Jens Keilwagen, Marc Strickert, et al.
BMC Bioinformatics|March 24, 2010
Apples and oranges: avoiding different priors in Bayesian DNA sequence analysisJens Keilwagen, Jan Grau, Stefan Posch, et al.
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