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Bioinformatics (Oxford, England)
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October 11, 2025
Memory-efficient, accelerated protein interaction inference with blocked, multi-GPU D-SCRIPT
Daniel E Schäffer, Samuel Sledzieski, Lenore Cowen, et al.
Plos Computational Biology
|
September 11, 2025
kMermaid: Ultrafast metagenomic read assignment to protein clusters by hashing of amino acid k-mer frequencies
Anastasia Lucas, Daniel E Schäffer, Jayamanna Wickramasinghe, et al.
Frontiers in Genetics
|
March 3, 2020
Functional Innovation in the Evolution of the Calcium-Dependent System of the Eukaryotic Endoplasmic Reticulum
Daniel E Schäffer, Lakshminarayan M Iyer, A Maxwell Burroughs, et al.
Nucleic Acids Research
|
November 22, 2015
Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling
A Maxwell Burroughs, Dapeng Zhang, Daniel E Schäffer, et al.
ISME Communications
|
December 4, 2023
Microbial gene expression analysis of healthy and cancerous esophagus uncovers bacterial biomarkers of clinical outcomes
Daniel E Schäffer, Wenrui Li, Abdurrahman Elbasir, et al.
BMC Genomics
|
April 12, 2022
Inferring mammalian tissue-specific regulatory conservation by predicting tissue-specific differences in open chromatin
Irene M Kaplow, Daniel E Schäffer, Morgan E Wirthlin, et al.
Nature Communications
|
February 11, 2023
A deep learning approach reveals unexplored landscape of viral expression in cancer
Abdurrahman Elbasir, Ying Ye, Daniel E Schäffer, et al.
Science (New York, N.Y.)
|
April 27, 2023
Relating enhancer genetic variation across mammals to complex phenotypes using machine learning
Irene M Kaplow, Alyssa J Lawler, Daniel E Schäffer, et al.
Nature Microbiology
|
May 28, 2024
Multiple sclerosis patient-derived spontaneous B cells have distinct EBV and host gene expression profiles in active disease
Samantha S Soldan, Chenhe Su, Maria Chiara Monaco, et al.
Science (New York, N.Y.)
|
February 29, 2024
Vocal learning-associated convergent evolution in mammalian proteins and regulatory elements
Morgan E Wirthlin, Tobias A Schmid, Julie E Elie, et al.
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Search research articles
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Showing results (1-10 of 11) with videos related to
Sort By:
Page
of 2
Bioinformatics (Oxford, England)
|
October 11, 2025
Memory-efficient, accelerated protein interaction inference with blocked, multi-GPU D-SCRIPT
Daniel E Schäffer, Samuel Sledzieski, Lenore Cowen, et al.
Plos Computational Biology
|
September 11, 2025
kMermaid: Ultrafast metagenomic read assignment to protein clusters by hashing of amino acid k-mer frequencies
Anastasia Lucas, Daniel E Schäffer, Jayamanna Wickramasinghe, et al.
Frontiers in Genetics
|
March 3, 2020
Functional Innovation in the Evolution of the Calcium-Dependent System of the Eukaryotic Endoplasmic Reticulum
Daniel E Schäffer, Lakshminarayan M Iyer, A Maxwell Burroughs, et al.
Nucleic Acids Research
|
November 22, 2015
Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling
A Maxwell Burroughs, Dapeng Zhang, Daniel E Schäffer, et al.
ISME Communications
|
December 4, 2023
Microbial gene expression analysis of healthy and cancerous esophagus uncovers bacterial biomarkers of clinical outcomes
Daniel E Schäffer, Wenrui Li, Abdurrahman Elbasir, et al.
BMC Genomics
|
April 12, 2022
Inferring mammalian tissue-specific regulatory conservation by predicting tissue-specific differences in open chromatin
Irene M Kaplow, Daniel E Schäffer, Morgan E Wirthlin, et al.
Nature Communications
|
February 11, 2023
A deep learning approach reveals unexplored landscape of viral expression in cancer
Abdurrahman Elbasir, Ying Ye, Daniel E Schäffer, et al.
Science (New York, N.Y.)
|
April 27, 2023
Relating enhancer genetic variation across mammals to complex phenotypes using machine learning
Irene M Kaplow, Alyssa J Lawler, Daniel E Schäffer, et al.
Nature Microbiology
|
May 28, 2024
Multiple sclerosis patient-derived spontaneous B cells have distinct EBV and host gene expression profiles in active disease
Samantha S Soldan, Chenhe Su, Maria Chiara Monaco, et al.
Science (New York, N.Y.)
|
February 29, 2024
Vocal learning-associated convergent evolution in mammalian proteins and regulatory elements
Morgan E Wirthlin, Tobias A Schmid, Julie E Elie, et al.
Page
of 2