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IEEE/ACM Transactions on Computational Biology and Bioinformatics|May 3, 2008
Consensus genetic maps as median orders from inconsistent sourcesBenjamin N Jackson, Patrick S Schnable, Srinivas AluruNucleic Acids Research|October 9, 2012
Reverse engineering and analysis of large genome-scale gene networksManeesha Aluru, Jaroslaw Zola, Dan Nettleton, et al.Bioinformatics (Oxford, England)|June 8, 2023
MCPNet: a parallel maximum capacity-based genome-scale gene network construction frameworkTony C Pan, Sriram P Chockalingam, Maneesha Aluru, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|October 10, 2017
Kmerind: A Flexible Parallel Library for K-mer Indexing of Biological Sequences on Distributed Memory SystemsTony Pan, Patrick Flick, Chirag Jain, et al.BMC Bioinformatics|December 23, 2018
An SVM-based method for assessment of transcription factor-DNA complex modelsRosario I Corona, Sanjana Sudarshan, Srinivas Aluru, et al.Plos One|April 14, 2015
Fast and accurate construction of ultra-dense consensus genetic maps using evolution strategy optimizationDavid Mester, Yefim Ronin, Patrick Schnable, et al.Bioinformatics (Oxford, England)|November 14, 2018
A fast adaptive algorithm for computing whole-genome homology mapsChirag Jain, Sergey Koren, Alexander Dilthey, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|May 1, 2018
A Fast Approximate Algorithm for Mapping Long Reads to Large Reference DatabasesChirag Jain, Alexander Dilthey, Sergey Koren, et al.Genome Research|September 4, 2003
PCAP: a whole-genome assembly programXiaoqiu Huang, Jianmin Wang, Srinivas Aluru, et al.Bioinformatics (Oxford, England)|December 10, 2021
EnGRaiN: a supervised ensemble learning method for recovery of large-scale gene regulatory networksManeesha Aluru, Harsh Shrivastava, Sriram P Chockalingam, et al.Pageof 7