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Proceedings of the National Academy of Sciences of the United States of America|October 3, 2015
Regulation of outer kinetochore Ndc80 complex-based microtubule attachments by the central kinetochore Mis12/MIND complexEmily M Kudalkar, Emily A Scarborough, Neil T Umbreit, et al.Journal of Proteome Research|January 11, 2023
Improved Analysis of Cross-Linking Mass Spectrometry Data with Kojak 2.0, Advanced by Integration into the Trans-Proteomic PipelineMichael R Hoopmann, David D Shteynberg, Alex Zelter, et al.Biorxiv : the Preprint Server for Biology|February 23, 2026
Is Protein Quantification and Physical Normalization Always Necessary in Proteomics?Alex Zelter, Michael Riffle, Gennifer E Merrihew, et al.Genome Research|August 10, 2011
The Proteome Folding Project: proteome-scale prediction of structure and functionKevin Drew, Patrick Winters, Glenn L Butterfoss, et al.Biorxiv : the Preprint Server for Biology|May 4, 2026
Multimodal analysis of molecular remodeling in aging spleen identified global and cell type specific changesKatarina Vlajic, Alison Luciano, Gennifer E Merrihew, et al.Journal of Proteomics|February 10, 2015
Integrated RNA- and protein profiling of fermentation and respiration in diploid budding yeast provides insight into nutrient control of cell growth and developmentEmmanuelle Becker, Yuchen Liu, Aurélie Lardenois, et al.Nature Communications|November 6, 2025
Carafe enables high quality in silico spectral library generation for data-independent acquisition proteomicsBo Wen, Chris Hsu, David Shteynberg, et al.Journal of Proteome Research|December 30, 2025
Improvements to Casanovo, a Deep Learning <i>De Novo</i> Peptide SequencerGwenneth Straub, Varun Ananth, William E Fondrie, et al.Structure (London, England : 1993)|June 18, 2022
Cullin-independent recognition of HHARI substrates by a dynamic RBR catalytic domainKatherine H Reiter, Alex Zelter, Maria K Janowska, et al.Genetics|September 19, 2014
Kinetochore biorientation in Saccharomyces cerevisiae requires a tightly folded conformation of the Ndc80 complexJerry F Tien, Neil T Umbreit, Alex Zelter, et al.Pageof 7