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Journal of Chemical Information and Modeling|July 16, 2024
WEDAP: A Python Package for Streamlined Plotting of Molecular Simulation DataDarian T Yang, Lillian T ChongChemical Science|March 19, 2019
Protein-protein binding pathways and calculations of rate constants using fully-continuous, explicit-solvent simulationsAli S Saglam, Lillian T ChongBiorxiv : the Preprint Server for Biology|June 3, 2024
WEDAP: A Python Package for Streamlined Plotting of Molecular Simulation DataDarian T Yang, Lillian T ChongBiophysical Journal|February 2, 2011
Molecular simulations of mutually exclusive folding in a two-domain protein switchBrandon M Mills, Lillian T ChongCurrent Opinion in Pharmacology|October 12, 2010
Reaching biological timescales with all-atom molecular dynamics simulationsMatthew C Zwier, Lillian T ChongThe Journal of Physical Chemistry. B|December 18, 2015
Highly Efficient Computation of the Basal kon using Direct Simulation of Protein-Protein Association with Flexible Molecular ModelsAli S Saglam, Lillian T ChongAnnual Review of Biophysics|March 5, 2011
Equilibrium sampling in biomolecular simulationsDaniel M ZuckermanThe Journal of Chemical Physics|March 23, 2021
The RED scheme: Rate-constant estimation from pre-steady state weighted ensemble simulationsAlex J DeGrave, Anthony T Bogetti, Lillian T ChongBiorxiv : the Preprint Server for Biology|October 17, 2024
Rare-Event Sampling using a Reinforcement Learning-Based Weighted Ensemble MethodDarian T Yang, Alex M Goldberg, Lillian T ChongJournal of Chemical Theory and Computation|November 26, 2015
Efficient Explicit-Solvent Molecular Dynamics Simulations of Molecular Association Kinetics: Methane/Methane, Na(+)/Cl(-), Methane/Benzene, and K(+)/18-Crown-6 EtherMatthew C Zwier, Joseph W Kaus, Lillian T ChongPageof 15