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Annual Review of Biophysics
|
March 5, 2011
Equilibrium sampling in biomolecular simulations
Daniel M Zuckerman
Journal of Chemical Theory and Computation
|
August 27, 2011
Beyond microscopic reversibility: Are observable non-equilibrium processes precisely reversible?
Divesh Bhatt, Daniel M Zuckerman
Journal of Computational Chemistry
|
November 29, 2011
Accelerating molecular Monte Carlo simulations using distance and orientation-dependent energy tables: tuning from atomistic accuracy to smoothed "coarse-grained" models
Steven Lettieri, Daniel M Zuckerman
Annual Reports in Computational Chemistry
|
May 11, 2010
Quantifying uncertainty and sampling quality in biomolecular simulations
Alan Grossfield, Daniel M Zuckerman
The Journal of Chemical Physics
|
January 3, 2016
Tabulation as a high-resolution alternative to coarse-graining protein interactions: Initial application to virus capsid subunits
Justin Spiriti, Daniel M Zuckerman
Journal of Chemical Theory and Computation
|
December 3, 2015
A Second Look at Canonical Sampling of Biomolecules Using Replica Exchange Simulation [J. Chem. Theory Comput. 2, 1200-1202 (2006)]
Daniel M Zuckerman, Edward Lyman
The Journal of Physical Chemistry. B
|
February 19, 2024
From Average Transient Transporter Currents to Microscopic Mechanism─A Bayesian Analysis
August George, Daniel M Zuckerman
The Journal of Chemical Physics
|
March 5, 2009
Resampling improves the efficiency of a "fast-switch" equilibrium sampling protocol
Edward Lyman, Daniel M Zuckerman
The Journal of Physical Chemistry. B
|
October 16, 2007
On the structural convergence of biomolecular simulations by determination of the effective sample size
Edward Lyman, Daniel M Zuckerman
Journal of Chemical Theory and Computation
|
December 2, 2008
A Second Look at Canonical Sampling of Biomolecules using Replica Exchange Simulation
Daniel M Zuckerman, Edward Lyman
Page
of 10
Search research articles
Search
Showing results (1-10 of 97) with videos related to
Sort By:
Page
of 10
Annual Review of Biophysics
|
March 5, 2011
Equilibrium sampling in biomolecular simulations
Daniel M Zuckerman
Journal of Chemical Theory and Computation
|
August 27, 2011
Beyond microscopic reversibility: Are observable non-equilibrium processes precisely reversible?
Divesh Bhatt, Daniel M Zuckerman
Journal of Computational Chemistry
|
November 29, 2011
Accelerating molecular Monte Carlo simulations using distance and orientation-dependent energy tables: tuning from atomistic accuracy to smoothed "coarse-grained" models
Steven Lettieri, Daniel M Zuckerman
Annual Reports in Computational Chemistry
|
May 11, 2010
Quantifying uncertainty and sampling quality in biomolecular simulations
Alan Grossfield, Daniel M Zuckerman
The Journal of Chemical Physics
|
January 3, 2016
Tabulation as a high-resolution alternative to coarse-graining protein interactions: Initial application to virus capsid subunits
Justin Spiriti, Daniel M Zuckerman
Journal of Chemical Theory and Computation
|
December 3, 2015
A Second Look at Canonical Sampling of Biomolecules Using Replica Exchange Simulation [J. Chem. Theory Comput. 2, 1200-1202 (2006)]
Daniel M Zuckerman, Edward Lyman
The Journal of Physical Chemistry. B
|
February 19, 2024
From Average Transient Transporter Currents to Microscopic Mechanism─A Bayesian Analysis
August George, Daniel M Zuckerman
The Journal of Chemical Physics
|
March 5, 2009
Resampling improves the efficiency of a "fast-switch" equilibrium sampling protocol
Edward Lyman, Daniel M Zuckerman
The Journal of Physical Chemistry. B
|
October 16, 2007
On the structural convergence of biomolecular simulations by determination of the effective sample size
Edward Lyman, Daniel M Zuckerman
Journal of Chemical Theory and Computation
|
December 2, 2008
A Second Look at Canonical Sampling of Biomolecules using Replica Exchange Simulation
Daniel M Zuckerman, Edward Lyman
Page
of 10