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Bioinformatics (Oxford, England)|May 26, 2021
LevioSAM: fast lift-over of variant-aware reference alignmentsTaher Mun, Nae-Chyun Chen, Ben LangmeadAlgorithms in Bioinformatics : ... International Workshop, WABI ..., Proceedings. WABI (Workshop)|November 21, 2022
Pangenomic Genotyping with the Marker ArrayTaher Mun, Naga Sai Kavya Vaddadi, Ben LangmeadGenome Biology|August 13, 2010
Cloud-scale RNA-sequencing differential expression analysis with MyrnaBen Langmead, Kasper D Hansen, Jeffrey T LeekBioinformatics (Oxford, England)|July 19, 2018
Scaling read aligners to hundreds of threads on general-purpose processorsBen Langmead, Christopher Wilks, Valentin Antonescu, et al.Genome Research|May 31, 2023
Efficient taxa identification using a pangenome indexOmar Ahmed, Massimiliano Rossi, Christina Boucher, et al.Biorxiv : the Preprint Server for Biology|June 12, 2025
Movi Color: fast and accurate long-read classification with the move structureSteven Tan, Sina Majidian, Ben Langmead, et al.Briefings in Bioinformatics|June 12, 2025
EvANI benchmarking workflow for evolutionary distance estimationSina Majidian, Stephen Hwang, Mohsen Zakeri, et al.BMC Bioinformatics|November 18, 2011
ReCount: a multi-experiment resource of analysis-ready RNA-seq gene count datasetsAlyssa C Frazee, Ben Langmead, Jeffrey T LeekBiorxiv : the Preprint Server for Biology|November 18, 2024
Improved pangenomic classification accuracy with chain statisticsNathaniel K Brown, Vikram S Shivakumar, Ben LangmeadAlgorithms for Molecular Biology : AMB|May 5, 2023
Pangenomic genotyping with the marker arrayTaher Mun, Naga Sai Kavya Vaddadi, Ben LangmeadPageof 13