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Genome Research|April 14, 2025
A Hitchhiker's Guide to long-read genomic analysisMedhat Mahmoud, Daniel P Agustinho, Fritz J SedlazeckMemorias Do Instituto Oswaldo Cruz|May 10, 2018
Peeling the onion: the outer layers of Cryptococcus neoformansDaniel P Agustinho, Liza C Miller, Lucy X Li, et al.Nature Methods|April 30, 2024
Unveiling microbial diversity: harnessing long-read sequencing technologyDaniel P Agustinho, Yilei Fu, Vipin K Menon, et al.Mbio|March 10, 2021
The Transcription Factor Pdr802 Regulates Titan Cell Formation and Pathogenicity of Cryptococcus neoformansJulia C V Reuwsaat, Daniel P Agustinho, Heryk Motta, et al.Biorxiv : the Preprint Server for Biology|May 4, 2026
Two closely related β-1,2-xylosyltransferases differentially impact fungal glycan synthesisDaphne Boodwa-Ko, J Stacey Klutts, Kazuhiro Aoki, et al.Biorxiv : the Preprint Server for Biology|May 7, 2026
Rapid phylogenomic analysis for viral surveillance and metagenomic profiling with Omni2TreeSina Majidian, Adrian Chalco, Xinchang Zheng, et al.Biorxiv : the Preprint Server for Biology|June 29, 2026
Evolutionary dynamics of Respiratory Syncytial Virus in pre-pandemic, pandemic, and post-pandemic periods in Houston, Texas, USAVasanthi Avadhanula, Daniel P Agustinho, Leila C Sahni, et al.Scientific Reports|July 2, 2025
Complete genomic characterization of global pathogens respiratory syntical virus and human norovirus using probe based capture enrichmentSravya V Bhamidipati, Anil Surathu, Hsu Chao, et al.Biorxiv : the Preprint Server for Biology|September 30, 2024
Complete Genomic Characterization of Global Pathogens, Respiratory Syncytial Virus (RSV), and Human Norovirus (HuNoV) Using Probe-based Capture EnrichmentSravya V Bhamidipati, Anil Surathu, Hsu Chao, et al.Pageof 1