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Bioinformatics (Oxford, England)
|
July 20, 2023
GradPose: a very fast and memory-efficient gradient descent-based tool for superimposing millions of protein structures from computational simulations
Daniel T Rademaker, Kevin J van Geemen, Li C Xue
Biomolecules
|
December 23, 2022
Entropy and Variability: A Second Opinion by Deep Learning
Daniel T Rademaker, Li C Xue, Peter A C 't Hoen, et al.
Frontiers in Immunology
|
April 8, 2025
Predicting reverse-bound peptide conformations in MHC Class II with PANDORA
Daniel T Rademaker, Farzaneh M Parizi, Marieke van Vreeswijk, et al.
Cell Reports Methods
|
April 2, 2026
A high-speed attention network for MHC-bound peptide identification and 3D modeling
Coos A B Baakman, Giulia Crocioni, Cunliang Geng, et al.
Frontiers in Immunology
|
May 27, 2022
PANDORA: A Fast, Anchor-Restrained Modelling Protocol for Peptide: MHC Complexes
Dario F Marzella, Farzaneh M Parizi, Derek van Tilborg, et al.
Iscience
|
December 13, 2023
Quantifying the deformability of malaria-infected red blood cells using deep learning trained on synthetic cells
Daniel T Rademaker, Joshua J Koopmans, Gwendolyn M S M Thyen, et al.
Communications Biology
|
July 5, 2025
Author Correction: Geometric deep learning improves generalizability of MHC-bound peptide predictions
Dario F Marzella, Giulia Crocioni, Tadija Radusinović, et al.
Communications Biology
|
December 20, 2024
Geometric deep learning improves generalizability of MHC-bound peptide predictions
Dario F Marzella, Giulia Crocioni, Tadija Radusinović, et al.
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Search research articles
Search
Showing results (1-10 of 8) with videos related to
Sort By:
Page
of 1
Bioinformatics (Oxford, England)
|
July 20, 2023
GradPose: a very fast and memory-efficient gradient descent-based tool for superimposing millions of protein structures from computational simulations
Daniel T Rademaker, Kevin J van Geemen, Li C Xue
Biomolecules
|
December 23, 2022
Entropy and Variability: A Second Opinion by Deep Learning
Daniel T Rademaker, Li C Xue, Peter A C 't Hoen, et al.
Frontiers in Immunology
|
April 8, 2025
Predicting reverse-bound peptide conformations in MHC Class II with PANDORA
Daniel T Rademaker, Farzaneh M Parizi, Marieke van Vreeswijk, et al.
Cell Reports Methods
|
April 2, 2026
A high-speed attention network for MHC-bound peptide identification and 3D modeling
Coos A B Baakman, Giulia Crocioni, Cunliang Geng, et al.
Frontiers in Immunology
|
May 27, 2022
PANDORA: A Fast, Anchor-Restrained Modelling Protocol for Peptide: MHC Complexes
Dario F Marzella, Farzaneh M Parizi, Derek van Tilborg, et al.
Iscience
|
December 13, 2023
Quantifying the deformability of malaria-infected red blood cells using deep learning trained on synthetic cells
Daniel T Rademaker, Joshua J Koopmans, Gwendolyn M S M Thyen, et al.
Communications Biology
|
July 5, 2025
Author Correction: Geometric deep learning improves generalizability of MHC-bound peptide predictions
Dario F Marzella, Giulia Crocioni, Tadija Radusinović, et al.
Communications Biology
|
December 20, 2024
Geometric deep learning improves generalizability of MHC-bound peptide predictions
Dario F Marzella, Giulia Crocioni, Tadija Radusinović, et al.
Page
of 1