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BMC Research Notes|July 30, 2018
The Sierra Platinum Service for generating peak-calls for replicated ChIP-seq experimentsDaniel Wiegreffe, Lydia Müller, Jens Steuck, et al.
Bioinformatics (Oxford, England)|September 22, 2018
RNApuzzler: efficient outerplanar drawing of RNA-secondary structuresDaniel Wiegreffe, Daniel Alexander, Peter F Stadler, et al.
BMC Bioinformatics|October 8, 2020
Masakari: visualization supported statistical analysis of genome segmentationsDirk Zeckzer, Alrik Hausdorf, Nicole Hinzmann, et al.
Frontiers in Bioinformatics|September 2, 2024
A layout framework for genome-wide multiple sequence alignment graphsJeremias Schebera, Dirk Zeckzer, Daniel Wiegreffe
IEEE Computer Graphics and Applications|May 20, 2022
An Interactive Decision Support System for Land Reuse TasksYves Annanias, Dirk Zeckzer, Gerik Scheuermann, et al.
BMC Bioinformatics|September 17, 2016
Sierra platinum: a fast and robust peak-caller for replicated ChIP-seq experiments with visual quality-control and -steeringLydia Müller, Daniel Gerighausen, Mariam Farman, et al.
Algorithms for Molecular Biology : AMB|December 7, 2018
Superbubbles revisitedFabian Gärtner, Lydia Müller, Peter F Stadler
Theory in Biosciences = Theorie in Den Biowissenschaften|November 20, 2016
Design specifications for cellular regulationDavid C Krakauer, Lydia Müller, Sonja J Prohaska, et al.
Algorithms for Molecular Biology : AMB|September 28, 2018
Coordinate systems for supergenomesFabian Gärtner, Christian Höner Zu Siederdissen, Lydia Müller, et al.
IEEE Computer Graphics and Applications|November 17, 2015
A Decision-Support System for Sustainable Water Distribution System PlanningAlina Freund, Nazli Yonca Aydin, Dirk Zeckzer, et al.
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