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Briefings in Bioinformatics|January 4, 2017
Design of RNAs: comparing programs for inverse RNA foldingAlexander Churkin, Matan Drory Retwitzer, Vladimir Reinharz, et al.
Briefings in Bioinformatics|March 23, 2023
A computational approach for the identification of distant homologs of bacterial riboswitches based on inverse RNA foldingSumit Mukherjee, Matan Drory Retwitzer, Sara M Hubbell, et al.
Briefings in Bioinformatics|September 3, 2025
The bioinformatics of the finding that the hepatitis delta virus RNA editing mechanism by a conformational switch exists in genotype 7 in addition to genotype 3Rami Zakh, Alexander Churkin, Marina Parr, et al.
Bioinformatics (Oxford, England)|February 7, 2019
RiboD: a comprehensive database for prokaryotic riboswitchesSumit Mukherjee, Sukhen Das Mandal, Nikita Gupta, et al.
Computational and Structural Biotechnology Journal|June 12, 2025
Over time analysis of the codon usage of SARS-CoV-2 and its variantsAlma Davidson, Marina Parr, Franziska Totzeck, et al.
Open Forum Infectious Diseases|May 2, 2022
Modeling-Based Response-Guided DAA Therapy for Chronic Hepatitis C to Identify Individuals for Shortening Treatment DurationAshish Goyal, Alex Churkin, Danny Barash, et al.
Mathematics (Basel, Switzerland)|March 14, 2022
A Mathematical Model for early HBV and -HDV Kinetics during Anti-HDV TreatmentRami Zakh, Alexander Churkin, William Bietsch, et al.
BMC Genomics|January 5, 2007
In silico whole-genome screening for cancer-related single-nucleotide polymorphisms located in human mRNA untranslated regionsAbdel Aouacheria, Vincent Navratil, Ricardo López-Pérez, et al.
Genome Research|May 25, 2019
Recompleting the <i>Caenorhabditis elegans</i> genomeJun Yoshimura, Kazuki Ichikawa, Massa J Shoura, et al.
Mathematics (Basel, Switzerland)|September 20, 2021
A Mathematical Analysis of HDV Genotypes: From Molecules to CellsRami Zakh, Alexander Churkin, Franziska Totzeck, et al.
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