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Journal of Chemical Information and Modeling
|
February 9, 2023
SpikeScape: A Tool for Analyzing Structural Diversity in Experimental Structures of the SARS-CoV-2 Spike Glycoprotein
Darya Stepanenko, Stephanie Budhan, Carlos Simmerling
Viruses
|
July 27, 2024
Assessing pH-Dependent Conformational Changes in the Fusion Peptide Proximal Region of the SARS-CoV-2 Spike Glycoprotein
Darya Stepanenko, Yuzhang Wang, Carlos Simmerling
Physical Review Letters
|
December 3, 2021
Search and Localization Dynamics of the CRISPR-Cas9 System
Qiao Lu, Deepak Bhat, Darya Stepanenko, et al.
Biorxiv : the Preprint Server for Biology
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December 11, 2023
MHC-Fine: Fine-tuned AlphaFold for Precise MHC-Peptide Complex Prediction
Ernest Glukhov, Dmytro Kalitin, Darya Stepanenko, et al.
Biophysical Journal
|
May 16, 2024
MHC-Fine: Fine-tuned AlphaFold for precise MHC-peptide complex prediction
Ernest Glukhov, Dmytro Kalitin, Darya Stepanenko, et al.
Journal of the American Chemical Society
|
July 16, 2021
Free Energy Landscapes from SARS-CoV-2 Spike Glycoprotein Simulations Suggest that RBD Opening Can Be Modulated via Interactions in an Allosteric Pocket
Lucy Fallon, Kellon A A Belfon, Lauren Raguette, et al.
Proteins
|
October 20, 2025
Modeling Protein-Protein and Protein-Ligand Interactions by the ClusPro Team in CASP16
Ryota Ashizawa, Sergei Kotelnikov, Omeir Khan, et al.
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Search research articles
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Showing results (1-10 of 7) with videos related to
Sort By:
Page
of 1
Journal of Chemical Information and Modeling
|
February 9, 2023
SpikeScape: A Tool for Analyzing Structural Diversity in Experimental Structures of the SARS-CoV-2 Spike Glycoprotein
Darya Stepanenko, Stephanie Budhan, Carlos Simmerling
Viruses
|
July 27, 2024
Assessing pH-Dependent Conformational Changes in the Fusion Peptide Proximal Region of the SARS-CoV-2 Spike Glycoprotein
Darya Stepanenko, Yuzhang Wang, Carlos Simmerling
Physical Review Letters
|
December 3, 2021
Search and Localization Dynamics of the CRISPR-Cas9 System
Qiao Lu, Deepak Bhat, Darya Stepanenko, et al.
Biorxiv : the Preprint Server for Biology
|
December 11, 2023
MHC-Fine: Fine-tuned AlphaFold for Precise MHC-Peptide Complex Prediction
Ernest Glukhov, Dmytro Kalitin, Darya Stepanenko, et al.
Biophysical Journal
|
May 16, 2024
MHC-Fine: Fine-tuned AlphaFold for precise MHC-peptide complex prediction
Ernest Glukhov, Dmytro Kalitin, Darya Stepanenko, et al.
Journal of the American Chemical Society
|
July 16, 2021
Free Energy Landscapes from SARS-CoV-2 Spike Glycoprotein Simulations Suggest that RBD Opening Can Be Modulated via Interactions in an Allosteric Pocket
Lucy Fallon, Kellon A A Belfon, Lauren Raguette, et al.
Proteins
|
October 20, 2025
Modeling Protein-Protein and Protein-Ligand Interactions by the ClusPro Team in CASP16
Ryota Ashizawa, Sergei Kotelnikov, Omeir Khan, et al.
Page
of 1