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David Perahia

Showing results (31-40 of 68) with videos related to

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Journal of Molecular Graphics & Modelling|May 8, 2015
Recovery of the wild type atomic flexibility in the HIV-1 protease double mutantsValderes De Conto, Antônio S K Braz, David Perahia, et al.
Journal of Computational Chemistry|September 13, 2014
Polarizable molecular mechanics studies of Cu(I)/Zn(II) superoxide dismutase: bimetallic binding site and structured watersNohad Gresh, Krystel El Hage, David Perahia, et al.
Scientific Reports|June 24, 2021
Insights into the substrate binding mechanism of SULT1A1 through molecular dynamics with excited normal modes simulationsBalint Dudas, Daniel Toth, David Perahia, et al.
Journal of Molecular Biology|November 4, 2008
Collective motions in glucosamine-6-phosphate synthase: influence of ligand binding and role in ammonia channelling and opening of the fructose-6-phosphate binding siteNicolas Floquet, Philippe Durand, Bernard Maigret, et al.
European Biophysics Journal : EBJ|March 19, 2010
How to choose relevant multiple receptor conformations for virtual screening: a test case of Cdk2 and normal mode analysisOlivier Sperandio, Liliane Mouawad, Eulalie Pinto, et al.
Journal of Chemical Information and Modeling|June 22, 2024
MDFF_NM: Improved Molecular Dynamics Flexible Fitting into Cryo-EM Density Maps with a Multireplica Normal Mode-Based SearchZakaria L Dahmani, Ana Ligia Scott, Catherine Vénien-Bryan, et al.
Journal of Chemical Theory and Computation|June 11, 2026
Adaptive Normal Mode Sampling (aMDeNM) Enhances Exploration of Protein Conformational Space and Reveals the Functional Role of Frequency CouplingPedro T Resende-Lara, Maurício G S Costa, Balint Dudas, et al.
FEBS Letters|September 12, 2006
Normal mode analysis as a prerequisite for drug design: application to matrix metalloproteinases inhibitorsNicolas Floquet, Jean-Didier Marechal, Marie-Ange Badet-Denisot, et al.
Journal of Chemical Theory and Computation|November 26, 2015
Free Energy Profiles along Consensus Normal Modes Provide Insight into HIV-1 Protease Flap OpeningPaulo R Batista, Gaurav Pandey, Pedro G Pascutti, et al.
Journal of Chemical Theory and Computation|December 12, 2024
Extended Sampling of Macromolecular Conformations from Uniformly Distributed Points on Multidimensional Normal Mode HyperspheresAntoniel A S Gomes, Mauricio G S Costa, Maxime Louet, et al.
Pageof 7

Showing results (31-40 of 68) with videos related to

Sort By:
Pageof 7
Journal of Molecular Graphics & Modelling|May 8, 2015
Recovery of the wild type atomic flexibility in the HIV-1 protease double mutantsValderes De Conto, Antônio S K Braz, David Perahia, et al.
Journal of Computational Chemistry|September 13, 2014
Polarizable molecular mechanics studies of Cu(I)/Zn(II) superoxide dismutase: bimetallic binding site and structured watersNohad Gresh, Krystel El Hage, David Perahia, et al.
Scientific Reports|June 24, 2021
Insights into the substrate binding mechanism of SULT1A1 through molecular dynamics with excited normal modes simulationsBalint Dudas, Daniel Toth, David Perahia, et al.
Journal of Molecular Biology|November 4, 2008
Collective motions in glucosamine-6-phosphate synthase: influence of ligand binding and role in ammonia channelling and opening of the fructose-6-phosphate binding siteNicolas Floquet, Philippe Durand, Bernard Maigret, et al.
European Biophysics Journal : EBJ|March 19, 2010
How to choose relevant multiple receptor conformations for virtual screening: a test case of Cdk2 and normal mode analysisOlivier Sperandio, Liliane Mouawad, Eulalie Pinto, et al.
Journal of Chemical Information and Modeling|June 22, 2024
MDFF_NM: Improved Molecular Dynamics Flexible Fitting into Cryo-EM Density Maps with a Multireplica Normal Mode-Based SearchZakaria L Dahmani, Ana Ligia Scott, Catherine Vénien-Bryan, et al.
Journal of Chemical Theory and Computation|June 11, 2026
Adaptive Normal Mode Sampling (aMDeNM) Enhances Exploration of Protein Conformational Space and Reveals the Functional Role of Frequency CouplingPedro T Resende-Lara, Maurício G S Costa, Balint Dudas, et al.
FEBS Letters|September 12, 2006
Normal mode analysis as a prerequisite for drug design: application to matrix metalloproteinases inhibitorsNicolas Floquet, Jean-Didier Marechal, Marie-Ange Badet-Denisot, et al.
Journal of Chemical Theory and Computation|November 26, 2015
Free Energy Profiles along Consensus Normal Modes Provide Insight into HIV-1 Protease Flap OpeningPaulo R Batista, Gaurav Pandey, Pedro G Pascutti, et al.
Journal of Chemical Theory and Computation|December 12, 2024
Extended Sampling of Macromolecular Conformations from Uniformly Distributed Points on Multidimensional Normal Mode HyperspheresAntoniel A S Gomes, Mauricio G S Costa, Maxime Louet, et al.
Pageof 7