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Biorxiv : the Preprint Server for Biology|March 16, 2026
Sample-specific haplotype-resolved protein isoform characterization via long-read RNA-seq-based proteogenomicsDavid Wissel, Gloria M Sheynkman, Mark D RobinsonGenome Biology|February 26, 2026
A systematic benchmark of high-accuracy PacBio long-read RNA sequencing for transcript-level quantificationDavid Wissel, Madison M Mehlferber, Khue M Nguyen, et al.Biorxiv : the Preprint Server for Biology|June 12, 2025
Quantitative isoform profiling using deep coverage long-read RNA sequencing across early endothelial differentiationDavid Wissel, Madison M Mehlferber, Khue M Nguyen, et al.Biorxiv : the Preprint Server for Biology|April 3, 2026
Beyond gene length: Exon-intron architecture and isoform potential in the evolution of eukaryotic complexitySenbao Lu, Yue Bao, Gloria M Sheynkman, et al.Trends in Biochemical Sciences|March 13, 2017
Proteome-Scale Human InteractomicsKatja Luck, Gloria M Sheynkman, Ivy Zhang, et al.Journal of Mass Spectrometry : JMS|February 16, 2026
Advances in Mass Spectrometry Instrumentation and Methodology for Analysis of Alternative Protein IsoformsMicah D Lehe, Raghad Almofeez, Erin D Jeffery, et al.Human Molecular Genetics|August 12, 2022
Bridging the splicing gap in human genetics with long-read RNA sequencing: finding the protein isoform drivers of diseasePeter J Castaldi, Abdullah Abood, Charles R Farber, et al.Molecular & Cellular Proteomics : MCP|May 1, 2013
Discovery and mass spectrometric analysis of novel splice-junction peptides using RNA-SeqGloria M Sheynkman, Michael R Shortreed, Brian L Frey, et al.Annual Review of Analytical Chemistry (Palo Alto, Calif.)|April 7, 2016
Proteogenomics: Integrating Next-Generation Sequencing and Mass Spectrometry to Characterize Human Proteomic VariationGloria M Sheynkman, Michael R Shortreed, Anthony J Cesnik, et al.Current Stem Cell Reports|June 28, 2024
Transcription factors and splice factors - interconnected regulators of stem cell differentiationMadison M Mehlferber, Muge Kuyumcu-Martinez, Clint L Miller, et al.Pageof 23