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Davis J McCarthy

Showing results (1-10 of 54) with videos related to

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Genome Biology|February 26, 2024
A comparison of marker gene selection methods for single-cell RNA sequencing dataJeffrey M Pullin, Davis J McCarthy
Bioinformatics (Oxford, England)|January 30, 2009
Testing significance relative to a fold-change threshold is a TREATDavis J McCarthy, Gordon K Smyth
Biorxiv : the Preprint Server for Biology|October 3, 2025
simPIC:flexible simulation of paired-insertion counts for single-cell ATAC sequencing dataSagrika Chugh, Heejung Shim, Davis J McCarthy
Genome Biology|December 15, 2019
Vireo: Bayesian demultiplexing of pooled single-cell RNA-seq data without genotype referenceYuanhua Huang, Davis J McCarthy, Oliver Stegle
Nucleic Acids Research|January 31, 2012
Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variationDavis J McCarthy, Yunshun Chen, Gordon K Smyth
Bioinformatics (Oxford, England)|November 14, 2009
edgeR: a Bioconductor package for differential expression analysis of digital gene expression dataMark D Robinson, Davis J McCarthy, Gordon K Smyth
Biorxiv : the Preprint Server for Biology|December 23, 2024
Going beyond cell clustering and feature aggregation: Is there single cell level information in single-cell ATAC-seq data?Aaron Wing Cheung Kwok, Heejung Shim, Davis J McCarthy
Genome Biology|April 20, 2021
Personalized genome structure via single gamete sequencingRuqian Lyu, Vanessa Tsui, Davis J McCarthy, et al.
BMC Bioinformatics|November 4, 2022
Trade-off between conservation of biological variation and batch effect removal in deep generative modeling for single-cell transcriptomicsHui Li, Davis J McCarthy, Heejung Shim, et al.
Genome Biology|September 17, 2025
A hierarchical, count-based model highlights challenges in scATAC-seq data analysis and points to opportunities to extract finer-resolution informationAaron Wing Cheung Kwok, Heejung Shim, Davis J McCarthy
Pageof 6

Showing results (1-10 of 54) with videos related to

Sort By:
Pageof 6
Genome Biology|February 26, 2024
A comparison of marker gene selection methods for single-cell RNA sequencing dataJeffrey M Pullin, Davis J McCarthy
Bioinformatics (Oxford, England)|January 30, 2009
Testing significance relative to a fold-change threshold is a TREATDavis J McCarthy, Gordon K Smyth
Biorxiv : the Preprint Server for Biology|October 3, 2025
simPIC:flexible simulation of paired-insertion counts for single-cell ATAC sequencing dataSagrika Chugh, Heejung Shim, Davis J McCarthy
Genome Biology|December 15, 2019
Vireo: Bayesian demultiplexing of pooled single-cell RNA-seq data without genotype referenceYuanhua Huang, Davis J McCarthy, Oliver Stegle
Nucleic Acids Research|January 31, 2012
Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variationDavis J McCarthy, Yunshun Chen, Gordon K Smyth
Bioinformatics (Oxford, England)|November 14, 2009
edgeR: a Bioconductor package for differential expression analysis of digital gene expression dataMark D Robinson, Davis J McCarthy, Gordon K Smyth
Biorxiv : the Preprint Server for Biology|December 23, 2024
Going beyond cell clustering and feature aggregation: Is there single cell level information in single-cell ATAC-seq data?Aaron Wing Cheung Kwok, Heejung Shim, Davis J McCarthy
Genome Biology|April 20, 2021
Personalized genome structure via single gamete sequencingRuqian Lyu, Vanessa Tsui, Davis J McCarthy, et al.
BMC Bioinformatics|November 4, 2022
Trade-off between conservation of biological variation and batch effect removal in deep generative modeling for single-cell transcriptomicsHui Li, Davis J McCarthy, Heejung Shim, et al.
Genome Biology|September 17, 2025
A hierarchical, count-based model highlights challenges in scATAC-seq data analysis and points to opportunities to extract finer-resolution informationAaron Wing Cheung Kwok, Heejung Shim, Davis J McCarthy
Pageof 6