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Journal of Proteome Research|July 8, 2021
Accurately Assigning Peptides to Spectra When Only a Subset of Peptides Are RelevantAndy Lin, Deanna L Plubell, Uri Keich, et al.Biorxiv : the Preprint Server for Biology|June 10, 2024
Data Independent Acquisition to Inform the Development of Targeted Proteomics Assays Using a Triple Quadrupole Mass SpectrometerDeanna L Plubell, Eric Huang, Sandra E Spencer, et al.Journal of Proteome Research|May 6, 2025
Data Independent Acquisition to Inform the Development of Targeted Proteomics Assays Using a Triple Quadrupole Mass SpectrometerDeanna L Plubell, Eric Huang, Sandra E Spencer, et al.Scientific Reports|August 2, 2018
GM-CSF driven myeloid cells in adipose tissue link weight gain and insulin resistance via formation of 2-aminoadipateDeanna L Plubell, Alexandra M Fenton, Phillip A Wilmarth, et al.The Journal of Clinical Endocrinology and Metabolism|June 21, 2019
Elevated Lipoprotein(a) Levels Lower ABCA1 Cholesterol Efflux CapacityHagai Tavori, Alexandra M Fenton, Deanna L Plubell, et al.Nature Communications|April 28, 2025
Harmful algal blooms are preceded by a predictable and quantifiable shift in the oceanic microbiomeMiranda C Mudge, Michael Riffle, Gabriella Chebli, et al.Biorxiv : the Preprint Server for Biology|June 12, 2026
Revisiting resonance-excitation collision-induced dissociation for data-independent acquisitionChris Hsu, Lilian R Heil, Bo Wen, et al.Molecular & Cellular Proteomics : MCP|March 23, 2017
Extended Multiplexing of Tandem Mass Tags (TMT) Labeling Reveals Age and High Fat Diet Specific Proteome Changes in Mouse Epididymal Adipose TissueDeanna L Plubell, Phillip A Wilmarth, Yuqi Zhao, et al.Journal of Lipid Research|January 10, 2019
Genetic control of the mouse HDL proteome defines HDL traits, function, and heterogeneityNathalie Pamir, Calvin Pan, Deanna L Plubell, et al.Journal of Proteome Research|February 28, 2022
Putting Humpty Dumpty Back Together Again: What Does Protein Quantification Mean in Bottom-Up Proteomics?Deanna L Plubell, Lukas Käll, Bobbie-Jo Webb-Robertson, et al.Pageof 2