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Bioinformatics (Oxford, England)
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February 14, 2019
refineD: improved protein structure refinement using machine learning based restrained relaxation
Debswapna Bhattacharya
Proteins
|
August 29, 2012
3Drefine: consistent protein structure refinement by optimizing hydrogen bonding network and atomic-level energy minimization
Debswapna Bhattacharya, Jianlin Cheng
Biorxiv : the Preprint Server for Biology
|
February 3, 2025
RNAbpFlow: Base pair-augmented SE(3)-flow matching for conditional RNA 3D structure generation
Sumit Tarafder, Debswapna Bhattacharya
Biorxiv : the Preprint Server for Biology
|
November 14, 2023
lociPARSE: a locality-aware invariant point attention model for scoring RNA 3D structures
Sumit Tarafder, Debswapna Bhattacharya
Biorxiv : the Preprint Server for Biology
|
June 12, 2026
ORIGAMI: Orientation-Aware Graph Neural Network for Assessing Multimeric Interfaces of Protein Complex Structures
Xinyu Wang, Debswapna Bhattacharya
Bioinformatics Advances
|
May 4, 2026
PARSEbp: pairwise agreement-based RNA scoring with emphasis on base pairings
Sumit Tarafder, Debswapna Bhattacharya
Plos One
|
July 30, 2013
i3Drefine software for protein 3D structure refinement and its assessment in CASP10
Debswapna Bhattacharya, Jianlin Cheng
Journal of Molecular Biology
|
October 10, 2024
Sifting through the noise: A survey of diffusion probabilistic models and their applications to biomolecules
Trevor Norton, Debswapna Bhattacharya
Biorxiv : the Preprint Server for Biology
|
March 10, 2025
To pack or not to pack: revisiting protein side-chain packing in the post-AlphaFold era
Sriniketh Vangaru, Debswapna Bhattacharya
Biorxiv : the Preprint Server for Biology
|
November 24, 2025
PARSEbp: Pairwise Agreement-based RNA Scoring with Emphasis on Base Pairings
Sumit Tarafder, Debswapna Bhattacharya
Page
of 6
Search research articles
Search
Showing results (1-10 of 53) with videos related to
Sort By:
Page
of 6
Bioinformatics (Oxford, England)
|
February 14, 2019
refineD: improved protein structure refinement using machine learning based restrained relaxation
Debswapna Bhattacharya
Proteins
|
August 29, 2012
3Drefine: consistent protein structure refinement by optimizing hydrogen bonding network and atomic-level energy minimization
Debswapna Bhattacharya, Jianlin Cheng
Biorxiv : the Preprint Server for Biology
|
February 3, 2025
RNAbpFlow: Base pair-augmented SE(3)-flow matching for conditional RNA 3D structure generation
Sumit Tarafder, Debswapna Bhattacharya
Biorxiv : the Preprint Server for Biology
|
November 14, 2023
lociPARSE: a locality-aware invariant point attention model for scoring RNA 3D structures
Sumit Tarafder, Debswapna Bhattacharya
Biorxiv : the Preprint Server for Biology
|
June 12, 2026
ORIGAMI: Orientation-Aware Graph Neural Network for Assessing Multimeric Interfaces of Protein Complex Structures
Xinyu Wang, Debswapna Bhattacharya
Bioinformatics Advances
|
May 4, 2026
PARSEbp: pairwise agreement-based RNA scoring with emphasis on base pairings
Sumit Tarafder, Debswapna Bhattacharya
Plos One
|
July 30, 2013
i3Drefine software for protein 3D structure refinement and its assessment in CASP10
Debswapna Bhattacharya, Jianlin Cheng
Journal of Molecular Biology
|
October 10, 2024
Sifting through the noise: A survey of diffusion probabilistic models and their applications to biomolecules
Trevor Norton, Debswapna Bhattacharya
Biorxiv : the Preprint Server for Biology
|
March 10, 2025
To pack or not to pack: revisiting protein side-chain packing in the post-AlphaFold era
Sriniketh Vangaru, Debswapna Bhattacharya
Biorxiv : the Preprint Server for Biology
|
November 24, 2025
PARSEbp: Pairwise Agreement-based RNA Scoring with Emphasis on Base Pairings
Sumit Tarafder, Debswapna Bhattacharya
Page
of 6