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Journal of Biological Engineering|October 31, 2009
TinkerCell: modular CAD tool for synthetic biologyDeepak Chandran, Frank T Bergmann, Herbert M Sauro
Bioengineered Bugs|February 18, 2011
Computer-aided design of biological circuits using TinkerCellDeepak Chandran, Frank T Bergmann, Herbert M Sauro
Bioinformatics (Oxford, England)|July 7, 2009
Antimony: a modular model definition languageLucian P Smith, Frank T Bergmann, Deepak Chandran, et al.
ACS Synthetic Biology|May 9, 2013
Hierarchical modeling for synthetic biologyDeepak Chandran, Herbert M Sauro
Essays in Biochemistry|September 17, 2008
Standards and ontologies in computational systems biologyHerbert M Sauro, Frank T Bergmann
Bioinformatics (Oxford, England)|June 27, 2008
Comparing simulation results of SBML capable simulatorsFrank T Bergmann, Herbert M Sauro
Bioinformatics (Oxford, England)|October 14, 2006
Supporting the SBML layout extensionAnastasia Deckard, Frank T Bergmann, Herbert M Sauro
Bio Systems|June 2, 2018
A portable structural analysis library for reaction networksYosef Bedaso, Frank T Bergmann, Kiri Choi, et al.
Plos One|March 11, 2011
Standard biological parts knowledgebaseMichal Galdzicki, Cesar Rodriguez, Deepak Chandran, et al.
Methods in Molecular Biology (Clifton, N.J.)|April 22, 2009
Network dynamicsHerbert M Sauro
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