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Journal of the American Chemical Society|June 7, 2011
Detection of single nucleotide polymorphism using tension-dependent stochastic behavior of a single-molecule templateDeepak Koirala, Zhongbo Yu, Soma Dhakal, et al.Journal of the American Chemical Society|September 13, 2014
Quantification of topological coupling between DNA superhelicity and G-quadruplex formationSangeetha Selvam, Deepak Koirala, Zhongbo Yu, et al.Nature Communications|October 21, 2025
Structural basis for 3C and 3CD recruitment by enteroviral genomes during negative-strand RNA synthesisNaba Krishna Das, Alisha Patel, Reem Abdelghani, et al.Angewandte Chemie (International Ed. in English)|March 6, 2014
Yoctoliter thermometry for single-molecule investigations: a generic bead-on-a-tip temperature-control moduleDeepak Koirala, Jibin Abraham Punnoose, Prakash Shrestha, et al.BBA Advances|September 1, 2023
Advances in chaperone-assisted RNA crystallography using synthetic antibodiesHasan Al Banna, Naba Krishna Das, Manju Ojha, et al.Angewandte Chemie (International Ed. in English)|May 12, 2015
A molecular tuning fork in single-molecule mechanochemical sensingShankar Mandal, Deepak Koirala, Sangeetha Selvam, et al.Viruses|November 27, 2025
Roles of RNA Structures in the Genome Translation of (+) Sense RNA VirusesGuangming Lu, Bethel G Beyene, Joshua Miguele Camacho, et al.Plos One|July 5, 2012
Intramolecular folding in human ILPR fragment with three C-rich repeatsSoma Dhakal, Javonne L Lafontaine, Zhongbo Yu, et al.ACS Chemical Biology|November 26, 2019
Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits TranslationDeepak Koirala, Anna Lewicka, Yelena Koldobskaya, et al.Journal of the American Chemical Society|January 19, 2013
Long-loop G-quadruplexes are misfolded population minorities with fast transition kinetics in human telomeric sequencesDeepak Koirala, Chiran Ghimire, Christopher Bohrer, et al.Pageof 5