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Ecology and Evolution|February 28, 2022
Factors influencing range contraction of a rodent herbivore in a steppe grassland over the past decadesDefeng Bai, Xinru Wan, Guoliang Li, et al.Ecology and Evolution|August 8, 2020
Meta-replication, sampling bias, and multi-scale model selection: A case study on snow leopard (<i>Panthera uncia</i>) in western ChinaLuciano Atzeni, Samuel A Cushman, Defeng Bai, et al.Imeta|May 8, 2026
Accu16S/AccuITS: Accurate and broadly applicable amplicon sequencing for absolute microbiome quantificationDefeng Bai, Ou Fang, Caihua Li, et al.Imeta|March 3, 2025
MicrobiomeStatPlots: Microbiome statistics plotting gallery for meta-omics and bioinformaticsDefeng Bai, Chuang Ma, Jiani Xun, et al.Gut|April 28, 2026
Metagenomic identification of gut microbiome signatures for accurate diagnosis and prognostic prediction of Epstein-Barr virus-associated nasopharyngeal carcinomaKaiqi Lan, Defeng Bai, Li Yuan, et al.Pest Management Science|October 10, 2022
Synergistic effects of EP-1 and ivermectin mixture (iEP-1) to control rodents and their ectoparasitesMing Liu, Dongsheng Ren, Xinrong Wan, et al.Imetaomics|February 12, 2026
FoodMicroDB: A microbiome database for composition and time-series research in foodYahui Li, Hujie Lyu, Haifei Yang, et al.Advanced Science (Weinheim, Baden-Wurttemberg, Germany)|October 27, 2025
EasyAmplicon 2: Expanding PacBio and Nanopore Long Amplicon Sequencing Analysis Pipeline for MicrobiomeHao Luo, Defeng Bai, Zhihao Zhu, et al.Imetaomics|February 12, 2026
Unveiling microbial communities with EasyAmplicon: A user-centric guide to perform amplicon sequencing data analysisSalsabeel Yousuf, Hao Luo, Meiyin Zeng, et al.Imeta|March 3, 2025
EasyMetagenome: A user-friendly and flexible pipeline for shotgun metagenomic analysis in microbiome researchDefeng Bai, Tong Chen, Jiani Xun, et al.Pageof 2