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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|November 2, 2018
Small-World Networks and RNA Secondary StructuresDefne Surujon, Yann Ponty, Peter CloteJournal of Mathematical Biology|October 11, 2011
Expected distance between terminal nucleotides of RNA secondary structuresPeter Clote, Yann Ponty, Jean-Marc SteyaertPlos One|January 4, 2013
Using the fast fourier transform to accelerate the computational search for RNA conformational switchesEvan Senter, Saad Sheikh, Ivan Dotu, et al.Plos One|January 12, 2016
Use of a Probabilistic Motif Search to Identify Histidine Phosphotransfer Domain-Containing ProteinsDefne Surujon, David I RatnerBMC Bioinformatics|January 19, 2020
ShinyOmics: collaborative exploration of omics-dataDefne Surujon, Tim van OpijnenJournal of Mathematical Biology|October 13, 2007
Efficient sampling of RNA secondary structures from the Boltzmann ensemble of low-energy: the boustrophedon methodYann PontyMethods in Molecular Biology (Clifton, N.J.)|January 12, 2015
Drawing and editing the secondary structure(s) of RNAYann Ponty, Fabrice LeclercJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|November 1, 2011
An unbiased adaptive sampling algorithm for the exploration of RNA mutational landscapes under evolutionary pressureJérôme Waldispühl, Yann PontyMethods in Molecular Biology (Clifton, N.J.)|March 19, 2014
Introduction to RNA secondary structure comparisonStefanie Schirmer, Yann Ponty, Robert GiegerichBioinformatics (Oxford, England)|July 2, 2013
A weighted sampling algorithm for the design of RNA sequences with targeted secondary structure and nucleotide distributionVladimir Reinharz, Yann Ponty, Jérôme WaldispühlPageof 10