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Journal of Mathematical Biology|December 14, 2011
On the page number of RNA secondary structures with pseudoknotsPeter Clote, Stefan Dobrev, Ivan Dotu, et al.
Methods in Molecular Biology (Clifton, N.J.)|May 23, 2024
RNA Secondary Structure Modeling Following the IPANEMAP WorkflowDelphine Allouche, Grégoire De Bisschop, Afaf Saaidi, et al.
Nature Microbiology|September 13, 2022
A bacterial pan-genome makes gene essentiality strain-dependent and evolvableFederico Rosconi, Emily Rudmann, Jien Li, et al.
Genome Biology and Evolution|April 13, 2017
DeCoSTAR: Reconstructing the Ancestral Organization of Genes or Genomes Using Reconciled PhylogeniesWandrille Duchemin, Yoann Anselmetti, Murray Patterson, et al.
Nucleic Acids Research|April 28, 2017
Two ribosome recruitment sites direct multiple translation events within HIV1 Gag open reading frameJules Deforges, Sylvain de Breyne, Melissa Ameur, et al.
Proteomics|December 25, 2010
Fragmentation-free LC-MS can identify hundreds of proteinsPascal Bochet, Frank Rügheimer, Tina Guina, et al.
Bioinformatics (Oxford, England)|July 15, 2025
CREMSA: compressed indexing of (ultra) large multiple sequence alignmentsMikaël Salson, Arthur Boddaert, Awa Bousso Gueye, et al.
Nucleic Acids Research|September 12, 2014
Complete RNA inverse folding: computational design of functional hammerhead ribozymesIvan Dotu, Juan Antonio Garcia-Martin, Betty L Slinger, et al.
Nature Communications|December 18, 2025
Designing molecular RNA switches with Restricted Boltzmann machinesJorge Fernandez-de-Cossio-Diaz, Pierre Hardouin, Francois-Xavier Lyonnet du Moutier, et al.
Scientific Reports|April 8, 2016
Designing synthetic RNAs to determine the relevance of structural motifs in picornavirus IRES elementsJavier Fernandez-Chamorro, Gloria Lozano, Juan Antonio Garcia-Martin, et al.
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