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Plos One|September 12, 2025
Resolution of physics and deep learning-based protein engineering filters: A case study with a lipase for industrial substrate hydrolysisSpencer Gardiner, Peter Dollinger, Filip Kovacic, et al.
Biochemistry|April 10, 2020
Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix BundleKimberlee L Stern, Mason S Smith, Wendy M Billings, et al.
Proteins|August 31, 2021
Modeling SARS-CoV-2 proteins in the CASP-commons experimentAndriy Kryshtafovych, John Moult, Wendy M Billings, et al.
Nutrition Reviews|September 28, 2020
World trends in sugar-sweetened beverage and dietary sugar intakes in children and adolescents: a systematic reviewKaren Della Corte, Jessica Fife, Alexis Gardner, et al.
The Journal of Physical Chemistry. B|December 12, 2018
Integrated NMR, Fluorescence, and Molecular Dynamics Benchmark Study of Protein Mechanics and HydrodynamicsChristina Möckel, Jakub Kubiak, Oliver Schillinger, et al.
Frontiers in Nutrition|January 5, 2026
Modeling frameworks in nutritional epidemiology matter: comparing isotemporal and time-lagged Bayesian and frequentist approaches of carbohydrate intake and adipositySean Titensor, Joshua L Ebbert, David Camacho, et al.
Scientific Reports|September 19, 2023
A probabilistic view of protein stability, conformational specificity, and designJacob A Stern, Tyler J Free, Kimberlee L Stern, et al.
Biorxiv : the Preprint Server for Biology|September 5, 2025
Advancing Luciferase Activity and Stability beyond Directed Evolution and Rational Design through Expert Guided Deep LearningSpencer Gardiner, Joseph Talley, Christopher Haynie, et al.
ACS Catalysis|February 12, 2026
Advancing NanoLuc Luciferase Stability beyond Directed Evolution and Rational Design through Expert-Guided Deep LearningSpencer Gardiner, Joseph Talley, Tyler Green, et al.
ACS Omega|May 25, 2026
Conformation-Specific Design: Engineering Extracellular Signal-Regulated Kinase 2 Variants with Bias toward Active or Inactive StatesJoseph P Talley, Jacob A Stern, Siba Alharbi, et al.
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