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Diogo Borges Lima

Showing results (1-10 of 15) with videos related to

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Journal of Proteome Research|March 10, 2021
XlinkCyNET: A Cytoscape Application for Visualization of Protein Interaction Networks Based on Cross-Linking Mass Spectrometry IdentificationsDiogo Borges Lima, Ying Zhu, Fan Liu
Bioinformatics (Oxford, England)|November 18, 2021
TDFragMapper: a visualization tool for evaluating experimental parameters in top-down proteomicsJonathan Dhenin, Diogo Borges Lima, Mathieu Dupré, et al.
Analytical Chemistry|March 15, 2022
Optimized TMT-Based Quantitative Cross-Linking Mass Spectrometry Strategy for Large-Scale Interactomic StudiesMax Ruwolt, Lennart Schnirch, Diogo Borges Lima, et al.
Journal of the American Society for Mass Spectrometry|April 15, 2021
DiagnoTop: A Computational Pipeline for Discriminating Bacterial Pathogens without Database SearchDiogo Borges Lima, Mathieu Dupré, Marlon Dias Mariano Santos, et al.
Analytical Chemistry|August 27, 2025
AIRPred: A Deep Learning Model Predictor for Peptide Intensity Ratios in Cross-Linking Mass Spectrometry Improves Cross-Link Spectrum MatchingZehong Zhang, Mei Wu, Max Ruwolt, et al.
Analytical Chemistry|March 17, 2023
Real-Time Library Search Increases Cross-Link Identification Depth across All Levels of Sample ComplexityMax Ruwolt, Yi He, Diogo Borges Lima, et al.
Journal of Proteome Research|September 15, 2020
Optimization of a Top-Down Proteomics Platform for Closely Related Pathogenic Bacterial DiscriminationMathieu Dupré, Magalie Duchateau, Christian Malosse, et al.
Journal of Proteomics|December 18, 2018
Comprehensive identification of protein disulfide bonds with pepsin/trypsin digestion, Orbitrap HCD and Spectrum Identification MachineChuanlong Cui, Tong Liu, Tong Chen, et al.
Nature Communications|April 17, 2024
Cross-link assisted spatial proteomics to map sub-organelle proteomes and membrane protein topologiesYing Zhu, Kerem Can Akkaya, Julia Ruta, et al.
Journal of Proteome Research|February 1, 2024
RawVegetable 2.0: Refining XL-MS Data Acquisition through Enhanced Quality ControlLouise Ulrich Kurt, Milan Avila Clasen, Ísis Venturi Biembengut, et al.
Pageof 2

Showing results (1-10 of 15) with videos related to

Sort By:
Pageof 2
Journal of Proteome Research|March 10, 2021
XlinkCyNET: A Cytoscape Application for Visualization of Protein Interaction Networks Based on Cross-Linking Mass Spectrometry IdentificationsDiogo Borges Lima, Ying Zhu, Fan Liu
Bioinformatics (Oxford, England)|November 18, 2021
TDFragMapper: a visualization tool for evaluating experimental parameters in top-down proteomicsJonathan Dhenin, Diogo Borges Lima, Mathieu Dupré, et al.
Analytical Chemistry|March 15, 2022
Optimized TMT-Based Quantitative Cross-Linking Mass Spectrometry Strategy for Large-Scale Interactomic StudiesMax Ruwolt, Lennart Schnirch, Diogo Borges Lima, et al.
Journal of the American Society for Mass Spectrometry|April 15, 2021
DiagnoTop: A Computational Pipeline for Discriminating Bacterial Pathogens without Database SearchDiogo Borges Lima, Mathieu Dupré, Marlon Dias Mariano Santos, et al.
Analytical Chemistry|August 27, 2025
AIRPred: A Deep Learning Model Predictor for Peptide Intensity Ratios in Cross-Linking Mass Spectrometry Improves Cross-Link Spectrum MatchingZehong Zhang, Mei Wu, Max Ruwolt, et al.
Analytical Chemistry|March 17, 2023
Real-Time Library Search Increases Cross-Link Identification Depth across All Levels of Sample ComplexityMax Ruwolt, Yi He, Diogo Borges Lima, et al.
Journal of Proteome Research|September 15, 2020
Optimization of a Top-Down Proteomics Platform for Closely Related Pathogenic Bacterial DiscriminationMathieu Dupré, Magalie Duchateau, Christian Malosse, et al.
Journal of Proteomics|December 18, 2018
Comprehensive identification of protein disulfide bonds with pepsin/trypsin digestion, Orbitrap HCD and Spectrum Identification MachineChuanlong Cui, Tong Liu, Tong Chen, et al.
Nature Communications|April 17, 2024
Cross-link assisted spatial proteomics to map sub-organelle proteomes and membrane protein topologiesYing Zhu, Kerem Can Akkaya, Julia Ruta, et al.
Journal of Proteome Research|February 1, 2024
RawVegetable 2.0: Refining XL-MS Data Acquisition through Enhanced Quality ControlLouise Ulrich Kurt, Milan Avila Clasen, Ísis Venturi Biembengut, et al.
Pageof 2