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Nature Aging|April 28, 2023
Toward an improved definition of a healthy microbiome for healthy agingTarini Shankar Ghosh, Fergus Shanahan, Paul W O'TooleGastroenterology|November 30, 2020
The Healthy Microbiome-What Is the Definition of a Healthy Gut Microbiome?Fergus Shanahan, Tarini S Ghosh, Paul W O'TooleThe American Journal of Gastroenterology|March 9, 2019
The Gut Microbiota in Causation, Detection, and Treatment of CancerClodagh L Murphy, Paul W OʼToole, Fergus ShanahanThe American Journal of Gastroenterology|December 14, 2007
Drug interactions in inflammatory bowel diseasePeter M Irving, Fergus Shanahan, David S RamptonInternational Journal of Food Sciences and Nutrition|October 25, 2016
A randomised, double-blind, placebo-controlled clinical study: the effects of a synbiotic, Lepicol, in adults with chronic, functional constipationSally Cudmore, Andrea Doolan, Seán Lacey, et al.Current Opinion in Microbiology|March 8, 2023
Human microbiome variance is underestimatedFergus Shanahan, Tarini S Ghosh, Paul W O'TooleAnnals of the New York Academy of Sciences|December 18, 2002
Type I insulin-like growth factor receptor expression on colorectal adenocarcinoma cell lines is decreased in response to the chemopreventive agent N-acetyl-l-cysteineRaymond G Kelly, Kenneth Nally, Fergus Shanahan, et al.Nature Microbiology|November 14, 2025
Exploring the concept of bacterial memoryKillian Scanlon, Fergus Shanahan, R Paul Ross, et al.Journal of Immunology (Baltimore, Md. : 1950)|December 17, 2013
Identification of a unique hybrid macrophage-polarization state following recovery from lipopolysaccharide toleranceChristine O'Carroll, Ailís Fagan, Fergus Shanahan, et al.Medical Microbiology and Immunology|February 14, 2014
Detection of Mycobacterium avium subspecies paratuberculosis in patients with Crohn's disease is unrelated to the presence of single nucleotide polymorphisms rs2241880 (ATG16L1) and rs10045431 (IL12B)James P Dalton, Alan Desmond, Fergus Shanahan, et al.Pageof 27