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Bioinformatics (Oxford, England)
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September 12, 2023
ActivePPI: quantifying protein-protein interaction network activity with Markov random fields
Chuanyuan Wang, Shiyu Xu, Duanchen Sun, et al.
IEEE Transactions on Computational Biology and Bioinformatics
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August 14, 2025
PGDTA: Predicting Drug-Target Affinity Using Three-Dimensional Structure of Protein Pocket and Graph Neural Network
Yunhai Li, Pengpai Li, Duanchen Sun, et al.
BMC Systems Biology
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September 28, 2017
NetGen: a novel network-based probabilistic generative model for gene set functional enrichment analysis
Duanchen Sun, Yinliang Liu, Xiang-Sun Zhang, et al.
Scientific Reports
|
September 1, 2018
CEA: Combination-based gene set functional enrichment analysis
Duanchen Sun, Yinliang Liu, Xiang-Sun Zhang, et al.
Briefings in Bioinformatics
|
March 17, 2024
Incorporating network diffusion and peak location information for better single-cell ATAC-seq data analysis
Jiating Yu, Jiacheng Leng, Zhichao Hou, et al.
Bioinformatics (Oxford, England)
|
July 4, 2024
Reverse network diffusion to remove indirect noise for better inference of gene regulatory networks
Jiating Yu, Jiacheng Leng, Fan Yuan, et al.
Communications Biology
|
January 7, 2026
Advancing spatial cellular communication inference with ligand diffusion and transport model
Jiating Yu, Jinyue Zhao, Tao Ren, et al.
Frontiers in Genetics
|
July 2, 2024
Identification of DNA motif pairs on paired sequences based on composite heterogeneous graph
Qiuqin Wu, Yang Li, Qi Wang, et al.
Briefings in Bioinformatics
|
October 3, 2017
Discovering cooperative biomarkers for heterogeneous complex disease diagnoses
Duanchen Sun, Xianwen Ren, Eszter Ari, et al.
Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
|
August 22, 2025
Enhancing Spatial Transcriptomics via Spatially Constrained Matrix Decomposition with EDGES
Jinyue Zhao, Jiating Yu, Yuqing Cao, et al.
Page
of 3
Search research articles
Search
Showing results (1-10 of 30) with videos related to
Sort By:
Page
of 3
Bioinformatics (Oxford, England)
|
September 12, 2023
ActivePPI: quantifying protein-protein interaction network activity with Markov random fields
Chuanyuan Wang, Shiyu Xu, Duanchen Sun, et al.
IEEE Transactions on Computational Biology and Bioinformatics
|
August 14, 2025
PGDTA: Predicting Drug-Target Affinity Using Three-Dimensional Structure of Protein Pocket and Graph Neural Network
Yunhai Li, Pengpai Li, Duanchen Sun, et al.
BMC Systems Biology
|
September 28, 2017
NetGen: a novel network-based probabilistic generative model for gene set functional enrichment analysis
Duanchen Sun, Yinliang Liu, Xiang-Sun Zhang, et al.
Scientific Reports
|
September 1, 2018
CEA: Combination-based gene set functional enrichment analysis
Duanchen Sun, Yinliang Liu, Xiang-Sun Zhang, et al.
Briefings in Bioinformatics
|
March 17, 2024
Incorporating network diffusion and peak location information for better single-cell ATAC-seq data analysis
Jiating Yu, Jiacheng Leng, Zhichao Hou, et al.
Bioinformatics (Oxford, England)
|
July 4, 2024
Reverse network diffusion to remove indirect noise for better inference of gene regulatory networks
Jiating Yu, Jiacheng Leng, Fan Yuan, et al.
Communications Biology
|
January 7, 2026
Advancing spatial cellular communication inference with ligand diffusion and transport model
Jiating Yu, Jinyue Zhao, Tao Ren, et al.
Frontiers in Genetics
|
July 2, 2024
Identification of DNA motif pairs on paired sequences based on composite heterogeneous graph
Qiuqin Wu, Yang Li, Qi Wang, et al.
Briefings in Bioinformatics
|
October 3, 2017
Discovering cooperative biomarkers for heterogeneous complex disease diagnoses
Duanchen Sun, Xianwen Ren, Eszter Ari, et al.
Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
|
August 22, 2025
Enhancing Spatial Transcriptomics via Spatially Constrained Matrix Decomposition with EDGES
Jinyue Zhao, Jiating Yu, Yuqing Cao, et al.
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of 3