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STAR Protocols|July 22, 2025
Protocol for differential analysis of pseudouridine modifications using nanopore DRS and unmodified transcriptome controlOleksandra Fanari, Michele Meseonznik, Dylan Bloch, et al.
ACS Sensors|June 27, 2023
Paired Capture and FISH Detection of Individual Virions Enable Cell-Free Determination of Infectious TitersYifang Liu, Jacob L Potts, Dylan Bloch, et al.
Gigabyte (Hong Kong, China)|July 4, 2024
Multicellular, IVT-derived, unmodified human transcriptome for nanopore-direct RNA analysisCaroline A McCormick, Stuart Akeson, Sepideh Tavakoli, et al.
RNA (New York, N.Y.)|July 9, 2025
Pseudouridine reprogramming in the human T-cell epitranscriptome: from primary to immortalized statesOleksandra Fanari, Dylan Bloch, Yuchen Qiu, et al.
Biorxiv : the Preprint Server for Biology|April 17, 2023
Multicellular, IVT-derived, unmodified human transcriptome for nanopore-direct RNA analysisCaroline A McCormick, Stuart Akeson, Sepideh Tavakoli, et al.
Biorxiv : the Preprint Server for Biology|May 20, 2024
mRNA psi profiling using nanopore DRS reveals cell type-specific pseudouridylationCaroline A McCormick, Michele Meseonznik, Yuchen Qiu, et al.
Cell Systems|March 21, 2025
Probing enzyme-dependent pseudouridylation using direct RNA sequencing to assess epitranscriptome plasticity in a neuronal cell lineOleksandra Fanari, Sepideh Tavakoli, Yuchen Qiu, et al.
Biorxiv : the Preprint Server for Biology|April 8, 2024
Probing enzyme-dependent pseudouridylation using direct RNA sequencing to assess neuronal epitranscriptome plasticityOleksandra Fanari, Sepideh Tavakoli, Yuchen Qiu, et al.
Nucleic Acids Research|April 21, 2026
Multimodal profiling reveals cell type-specific pseudouridine modification and density-dependent translational regulationCaroline A McCormick, Michele Meseonznik, Yuchen Qiu, et al.
Nature Communications|April 17, 2026
Cytoplasmic localization of pseudouridine synthase 7 facilitates a pseudouridine-dependent enhancement of cellular stress toleranceMinli Ruan, Sean M Engels, Matthew R Burroughs, et al.
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