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Plos One|March 17, 2021
A landscape for drug-target interactions based on network analysisEdgardo Galan-Vasquez, Ernesto Perez-RuedaFrontiers in Microbiology|June 20, 2022
Gene Regulatory Network Inference and Gene Module Regulating Virulence in <i>Fusarium oxysporum</i>Regnier Cano, Alexandre Rafael Lenz, Edgardo Galan-Vasquez, et al.Database : the Journal of Biological Databases and Curation|October 29, 2025
ENcyclopedia of TRAnscription Factors in Bacteria and Archaea genomes (ENTRAF) version 2.0Silvia Tenorio-Salgado, Cinthia Rodríguez Maya, Edgardo Galan-Vasquez, et al.Molecular Biosystems|March 4, 2017
Consensus architecture of promoters and transcription units in Escherichia coli: design principles for synthetic biologyCynthia Rangel-Chavez, Edgardo Galan-Vasquez, Agustino Martinez-AntonioComputational Biology and Chemistry|August 7, 2015
Distribution of putative xenogeneic silencers in prokaryote genomesErnesto Perez-Rueda, J Antonio IbarraFrontiers in Molecular Biosciences|January 11, 2020
Identification of Modules With Similar Gene Regulation and Metabolic Functions Based on Co-expression DataEdgardo Galán-Vásquez, Ernesto Perez-RuedaScience Progress|October 26, 2012
The repertoire of DNA-binding transcription factors in prokaryotes: functional and evolutionary lessonsErnesto Perez-Rueda, Mario Alberto Martinez-NuñezBMC Genomics|September 19, 2014
Comparative genomics of nucleotide metabolism: a tour to the past of the three cellular domains of lifeDagoberto Armenta-Medina, Lorenzo Segovia, Ernesto Perez-RuedaMethods in Molecular Biology (Clifton, N.J.)|August 3, 2022
Prediction of DNA-Binding Transcription Factors in Bacteria and Archaea GenomesLeonardo Ledesma, Rafael Hernandez-Guerrero, Ernesto Perez-RuedaComputational Biology and Chemistry|November 22, 2011
New insights on gene regulation in archaeaSilvia Tenorio-Salgado, Alejandro Huerta-Saquero, Ernesto Perez-RuedaPageof 5