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Nucleic Acids Research|January 27, 2025
methylGrapher: genome-graph-based processing of DNA methylation data from whole genome bisulfite sequencingWenjin Zhang, Juan F Macias-Velasco, Xiaoyu Zhuo, et al.
Cell Reports Methods|May 15, 2026
Quantifying reference alignment bias in functional genomics analysesNina Tekkey, John E Garza, Wenjin Zhang, et al.
Genome Research|May 13, 2025
Charting the regulatory landscape of TP53 on transposable elements in cancerXuan Qu, Yonghao Liang, Colin McCornack, et al.
Genome Research|May 14, 2026
Characterizing cytosine methylation of polymorphic transposable element insertions using human pangenome resourcesXiaoyu Zhuo, Chad Tomlinson, Edward A Belter, et al.
Medrxiv : the Preprint Server for Health Sciences|November 26, 2025
Genealogy based trait association with LOCATER boosts power at loci with allelic heterogeneityXinxin Wang, Ryan Christ, Erica Young, et al.
Genome Research|April 16, 2026
Genealogy-based trait association with LOCATER boosts power at loci with allelic heterogeneityXinxin Wang, Ryan Christ, Erica Young, et al.
Biorxiv : the Preprint Server for Biology|February 27, 2026
Fully T2T pedigree assemblies reveal genetic stability and epigenetic plasticity of human centromeres across inheritance and cell-fate transitionsShihua Dong, Xiaoyun Xing, Monika Cechova, et al.
Blood Cancer Journal|March 23, 2018
A multiple myeloma-specific capture sequencing platform discovers novel translocations and frequent, risk-associated point mutations in IGLL5Brian S White, Irena Lanc, Julie O'Neal, et al.
Biorxiv : the Preprint Server for Biology|January 9, 2026
Leveraging Human Pangenome for Improved Somatic Variant DetectionQichen Fu, Zilan Xin, Benpeng Miao, et al.
Plos Computational Biology|July 10, 2015
Genome Modeling System: A Knowledge Management Platform for GenomicsMalachi Griffith, Obi L Griffith, Scott M Smith, et al.
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