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Biophysical Journal|December 22, 2016
Toward Hydrodynamics with Solvent Free Lipid Models: STRD MartiniAndrew Zgorski, Edward LymanBiochemistry|September 10, 2019
Local Enrichment of Unsaturated Chains around the A2A Adenosine ReceptorLewen Yang, Edward LymanPhysical Review. E, Statistical, Nonlinear, and Soft Matter Physics|October 26, 2005
Steady states of a nonequilibrium lattice gasEdward Lyman, B SchmittmannBiophysical Journal|July 25, 2012
Agonist dynamics and conformational selection during microsecond simulations of the A(2A) adenosine receptorJi Young Lee, Edward LymanJournal of the American Chemical Society|September 26, 2012
Predictions for cholesterol interaction sites on the A2A adenosine receptorJi Young Lee, Edward LymanBiophysical Journal|February 28, 2021
Activation of G-protein-coupled receptors is thermodynamically linked to lipid solvationAlison N Leonard, Edward LymanJournal of Chemical Theory and Computation|August 27, 2011
Beyond microscopic reversibility: Are observable non-equilibrium processes precisely reversible?Divesh Bhatt, Daniel M ZuckermanJournal of Computational Chemistry|November 29, 2011
Accelerating molecular Monte Carlo simulations using distance and orientation-dependent energy tables: tuning from atomistic accuracy to smoothed "coarse-grained" modelsSteven Lettieri, Daniel M ZuckermanAnnual Reports in Computational Chemistry|May 11, 2010
Quantifying uncertainty and sampling quality in biomolecular simulationsAlan Grossfield, Daniel M ZuckermanThe Journal of Chemical Physics|January 3, 2016
Tabulation as a high-resolution alternative to coarse-graining protein interactions: Initial application to virus capsid subunitsJustin Spiriti, Daniel M ZuckermanPageof 15