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The Journal of Physical Chemistry. B|December 16, 2016
Hysteresis and the Cholesterol Dependent Phase Transition in Binary Lipid Mixtures with the Martini ModelClement Arnarez, Alexis Webb, Eric Rouvière, et al.Faraday Discussions|February 18, 2010
Hierarchical coarse-graining strategy for protein-membrane systems to access mesoscopic scalesGary S Ayton, Edward Lyman, Gregory A VothJournal of Computational Chemistry|June 9, 2009
Absolute free energies estimated by combining precalculated molecular fragment librariesXin Zhang, Artem B Mamonov, Daniel M ZuckermanThe Journal of Chemical Physics|July 10, 2010
Steady-state simulations using weighted ensemble path samplingDivesh Bhatt, Bin W Zhang, Daniel M ZuckermanJournal of Computational Chemistry|March 10, 2011
Extending fragment-based free energy calculations with library Monte Carlo simulation: annealing in interaction spaceSteven Lettieri, Artem B Mamonov, Daniel M ZuckermanJournal of Chemical Theory and Computation|June 25, 2016
Accurate Estimation of Protein Folding and Unfolding Times: Beyond Markov State ModelsErnesto Suárez, Joshua L Adelman, Daniel M ZuckermanThe Journal of Chemical Physics|March 3, 2007
Transition-event durations in one-dimensional activated processesBin W Zhang, David Jasnow, Daniel M ZuckermanJournal of Computational Chemistry|August 25, 2010
Rapid sampling of all-atom peptides using a library-based polymer-growth approachArtem B Mamonov, Xin Zhang, Daniel M ZuckermanThe Journal of Physical Chemistry. B|April 13, 2010
Efficient equilibrium sampling of all-atom peptides using library-based Monte CarloYing Ding, Artem B Mamonov, Daniel M ZuckermanBiophysical Journal|October 28, 2020
Should Virus Capsids Assemble Perfectly? Theory and Observation of DefectsJustin Spiriti, James F Conway, Daniel M ZuckermanPageof 15