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Plos One|December 10, 2009
Accurate and reliable cancer classification based on probabilistic inference of pathway activityJunjie Su, Byung-Jun Yoon, Edward R DoughertyBMC Bioinformatics|October 16, 2010
Identification of diagnostic subnetwork markers for cancer in human protein-protein interaction networkJunjie Su, Byung-Jun Yoon, Edward R DoughertyMolecular Biosystems|December 17, 2010
From biological pathways to regulatory networksRitwik K Layek, Aniruddha Datta, Edward R DoughertyBMC Systems Biology|December 23, 2018
An experimental design framework for Markovian gene regulatory networks under stationary control policyRoozbeh Dehghannasiri, Mohammad Shahrokh Esfahani, Edward R DoughertyIEEE Transactions on Bio-Medical Engineering|April 7, 2012
Generating stochastic gene regulatory networks consistent with pathway information and steady-state behaviorJason M Knight, Aniruddha Datta, Edward R DoughertyBMC Genomics|November 9, 2012
A systematic model of the LC-MS proteomics pipelineYouting Sun, Ulisses Braga-Neto, Edward R DoughertyPlos One|June 19, 2008
Critical dynamics in genetic regulatory networks: examples from four kingdomsEnrique Balleza, Elena R Alvarez-Buylla, Alvaro Chaos, et al.Briefings in Bioinformatics|April 27, 2016
Literature-based discovery of new candidates for drug repurposingHsih-Te Yang, Jiun-Huang Ju, Yue-Ting Wong, et al.International Journal of Oncology|February 10, 2004
Pathway analysis of informative genes from microarray data reveals that metabolism and signal transduction genes distinguish different subtypes of lymphomasCristian Mircean, Ioan Tabus, Tohru Kobayashi, et al.BMC Bioinformatics|July 13, 2007
Simcluster: clustering enumeration gene expression data on the simplex spaceRicardo Z N Vêncio, Leonardo Varuzza, Carlos A de B Pereira, et al.Pageof 32