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Elife|February 22, 2019
An updated phylogeny of the Alphaproteobacteria reveals that the parasitic Rickettsiales and Holosporales have independent originsSergio A Muñoz-Gómez, Sebastian Hess, Gertraud Burger, et al.Nature Ecology & Evolution|January 14, 2022
Site-and-branch-heterogeneous analyses of an expanded dataset favour mitochondria as sister to known AlphaproteobacteriaSergio A Muñoz-Gómez, Edward Susko, Kelsey Williamson, et al.Nature Microbiology|June 17, 2025
Phylogenomic analyses indicate the archaeal superphylum DPANN originated from free-living euryarchaeal-like ancestorsBrittany A Baker, Charley G P McCarthy, Purificación López-García, et al.Systematic Biology|March 17, 2007
Conditioned genome reconstruction: how to avoid choosing the conditioning genomeMatthew Spencer, David Bryant, Edward SuskoJournal of Mathematical Biology|February 21, 2022
Ancestral state reconstruction with large numbers of sequences and edge-length estimationLam Si Tung Ho, Edward SuskoMolecular Biology and Evolution|August 4, 2016
Smoothed Bootstrap Aggregation for Assessing Selection Pressure at Amino Acid SitesJoseph Mingrone, Edward Susko, Joseph BielawskiBMC Biology|February 15, 2017
Nuclear genetic codes with a different meaning of the UAG and the UAA codonTomáš Pánek, David Žihala, Martin Sokol, et al.Molecular Biology and Evolution|August 19, 2024
GTRpmix: A Linked General Time-Reversible Model for Profile Mixture ModelsHector Banos, Thomas K F Wong, Justin Daneau, et al.Molecular Biology and Evolution|August 3, 2014
Alignment errors strongly impact likelihood-based tests for comparing topologiesEli Levy Karin, Edward Susko, Tal PupkoBMC Structural Biology|October 18, 2013
Defining structural and evolutionary modules in proteins: a community detection approach to explore sub-domain architectureJose Sergio Hleap, Edward Susko, Christian BlouinPageof 21