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Nature Reviews. Immunology|August 9, 2017
Single-cell RNA sequencing to explore immune cell heterogeneityEfthymia Papalexi, Rahul SatijaNature Biotechnology|April 3, 2018
Integrating single-cell transcriptomic data across different conditions, technologies, and speciesAndrew Butler, Paul Hoffman, Peter Smibert, et al.Molecular Systems Biology|March 17, 2018
Molecular transitions in early progenitors during human cord blood hematopoiesisShiwei Zheng, Efthymia Papalexi, Andrew Butler, et al.The Journal of Experimental Medicine|October 7, 2018
Kinetics of adult hematopoietic stem cell differentiation in vivoSamik Upadhaya, Catherine M Sawai, Efthymia Papalexi, et al.Cell|June 11, 2019
Comprehensive Integration of Single-Cell DataTim Stuart, Andrew Butler, Paul Hoffman, et al.Nature Cell Biology|February 26, 2025
Systematic reconstruction of molecular pathway signatures using scalable single-cell perturbation screensLongda Jiang, Carol Dalgarno, Efthymia Papalexi, et al.Nature Genetics|March 2, 2021
Characterizing the molecular regulation of inhibitory immune checkpoints with multimodal single-cell screensEfthymia Papalexi, Eleni P Mimitou, Andrew W Butler, et al.Nature Methods|December 22, 2022
Efficient combinatorial targeting of RNA transcripts in single cells with Cas13 RNA Perturb-seqHans-Hermann Wessels, Alejandro Méndez-Mancilla, Yuhan Hao, et al.Nature Methods|April 24, 2019
Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cellsEleni P Mimitou, Anthony Cheng, Antonino Montalbano, et al.The Journal of Experimental Medicine|October 7, 2015
Dose-dependent role of the cohesin complex in normal and malignant hematopoiesisAaron D Viny, Christopher J Ott, Barbara Spitzer, et al.Pageof 3