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Peerj|December 13, 2021
Evaluating whole-genome sequencing quality metrics for enteric pathogen outbreaksDarlene D Wagner, Heather A Carleton, Eija Trees, et al.Journal of Microbiological Methods|July 14, 2023
Evaluation of the Illumina iSeq whole genome sequencing system for enteric disease surveillance and outbreak detectionEija Trees, Angela Poates, Ashley Sabol, et al.Plos One|January 1, 2019
Genome wide characterization of enterotoxigenic Escherichia coli serogroup O6 isolates from multiple outbreaks and sporadic infections from 1975-2016Vaishnavi Pattabiraman, Lee S Katz, Jessica C Chen, et al.Foodborne Pathogens and Disease|September 14, 2021
Assessment of Genetic Stability During Serial In Vitro Passage and In Vivo CarriageAshley Sabol, Yoo Jin Joung, Christine VanTubbergen, et al.Journal of Clinical Microbiology|May 17, 2013
Subtyping of Salmonella enterica serovar Newport outbreak isolates by CRISPR-MVLST and determination of the relationship between CRISPR-MVLST and PFGE resultsNikki Shariat, Margaret K Kirchner, Carol H Sandt, et al.Foodborne Pathogens and Disease|July 21, 2022
Sequencing of Enteric Bacteria: Library Preparation Procedure Matters for Accurate Identification and CharacterizationAngela Poates, Jenny Truong, Rebecca Lindsey, et al.Foodborne Pathogens and Disease|June 7, 2019
Metagenomic Approaches for Public Health Surveillance of Foodborne Infections: Opportunities and ChallengesHeather A Carleton, John Besser, Amanda J Williams-Newkirk, et al.Journal of Microbiological Methods|April 14, 2016
Multiple-locus variable-number tandem repeat analysis for strain discrimination of non-O157 Shiga toxin-producing Escherichia coliChris Timmons, Eija Trees, Efrain M Ribot, et al.Foodborne Pathogens and Disease|June 28, 2019
Interpretation of Whole-Genome Sequencing for Enteric Disease Surveillance and Outbreak InvestigationJohn M Besser, Heather A Carleton, Eija Trees, et al.Journal of Microbiological Methods|September 24, 2021
Comparison of four enzymatic library preparation kits for sequencing Shiga toxin-producing Escherichia coli for surveillance and outbreak detectionJenny Truong, Angela Poates, Yoo Jin Joung, et al.Pageof 4