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BMC Bioinformatics|March 1, 2006
GONOME: measuring correlations between GO terms and genomic positionsStefan M Stanley, Timothy L Bailey, John S Mattick
Bioinformatics (Oxford, England)|July 5, 2011
Tissue-specific prediction of directly regulated genesRobert C McLeay, Chris J Leat, Timothy L Bailey
RNA Biology|April 29, 2011
Potential in vivo roles of nucleic acid triple-helicesFabian A Buske, John S Mattick, Timothy L Bailey
BMC Bioinformatics|April 13, 2010
The value of position-specific priors in motif discovery using MEMETimothy L Bailey, Mikael Bodén, Tom Whitington, et al.
BMC Genomics|September 3, 2014
Differential motif enrichment analysis of paired ChIP-seq experimentsTom Lesluyes, James Johnson, Philip Machanick, et al.
BMC Bioinformatics|July 3, 2010
Dual-functioning transcription factors in the developmental gene network of Drosophila melanogasterDenis C Bauer, Fabian A Buske, Timothy L Bailey
Bioinformatics (Oxford, England)|February 19, 2011
FIMO: scanning for occurrences of a given motifCharles E Grant, Timothy L Bailey, William Stafford Noble
Nucleic Acids Research|May 24, 2011
Inferring transcription factor complexes from ChIP-seq dataTom Whitington, Martin C Frith, James Johnson, et al.
Nucleic Acids Research|July 18, 2006
MEME: discovering and analyzing DNA and protein sequence motifsTimothy L Bailey, Nadya Williams, Chris Misleh, et al.
Bioinformatics (Oxford, England)|April 5, 2020
T-Gene: improved target gene predictionTimothy O'Connor, Charles E Grant, Mikael Bodén, et al.
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