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Entropy (Basel, Switzerland)|December 8, 2020
A Multi-Scale Approach to Modeling <i>E. coli</i> ChemotaxisEran Agmon, Ryan K Spangler
Bioinformatics (Oxford, England)|February 8, 2022
Vivarium: an interface and engine for integrative multiscale modeling in computational biologyEran Agmon, Ryan K Spangler, Christopher J Skalnik, et al.
Arxiv|August 12, 2024
Foundations of a Compositional Systems BiologyEran Agmon
Current Opinion in Chemical Biology|June 24, 2017
Lipid homeostasis and regulated cell deathEran Agmon, Brent R Stockwell
Plos Computational Biology|June 16, 2023
Whole-cell modeling of E. coli colonies enables quantification of single-cell heterogeneity in antibiotic responsesChristopher J Skalnik, Sean Y Cheah, Mica Y Yang, et al.
Artificial Life|January 26, 2018
The Biological Foundations of Enactivism: A Report on a Workshop Held at Artificial Life XVEran Agmon, Matthew Egbert, Nathaniel Virgo
NPJ Systems Biology and Applications|April 20, 2026
Matters of life and death in computational cell biologyConnor McShaffrey, Eran Agmon, Randall D Beer
Arxiv|November 26, 2025
MATTERS OF LIFE AND DEATH IN COMPUTATIONAL CELL BIOLOGYConnor McShaffrey, Eran Agmon, Randall D Beer
Artificial Life|November 9, 2016
The Structure of Ontogenies in a Model ProtocellEran Agmon, Alexander J Gates, Randall D Beer
Scientific Reports|March 28, 2018
Modeling the effects of lipid peroxidation during ferroptosis on membrane propertiesEran Agmon, Jérôme Solon, Patricia Bassereau, et al.
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