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Methods in Molecular Biology (Clifton, N.J.)|March 10, 2009
Epistemological impacts of horizontal gene transfer on classification in microbiologyEric Bapteste, Yan BoucherBioessays : News and Reviews in Molecular, Cellular and Developmental Biology|March 26, 2009
Revisiting the concept of lineage in prokaryotes: a phylogenetic perspectiveYan Boucher, Eric BaptesteTrends in Microbiology|April 19, 2008
Lateral gene transfer challenges principles of microbial systematicsEric Bapteste, Yan BoucherBiology Direct|September 8, 2006
Refuting phylogenetic relationshipsJames Bucknam, Yan Boucher, Eric BaptesteArchaea (Vancouver, B.C.)|May 7, 2005
Higher-level classification of the Archaea: evolution of methanogenesis and methanogensEric Bapteste, Céline Brochier, Yan BoucherTrends in Microbiology|September 1, 2004
Phylogenetic reconstruction and lateral gene transferEric Bapteste, Yan Boucher, Jessica Leigh, et al.Trends in Microbiology|July 8, 2010
Clanistics: a multi-level perspective for harvesting unrooted gene treesFrançois-Joseph Lapointe, Philippe Lopez, Yan Boucher, et al.Comptes Rendus Biologies|March 14, 2009
Molecular phylogeny: reconstructing the forestPhilippe Lopez, Eric BaptesteBioessays : News and Reviews in Molecular, Cellular and Developmental Biology|November 9, 2020
Modeling the evolution of interconnected processes: It is the song and the singers: Tracking units of selection with interaction networksEric Bapteste, François PapalePageof 14