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Bioinformatics (Oxford, England)|February 1, 2013
MosaicFinder: identification of fused gene families in sequence similarity networksPierre-Alain Jachiet, Romain Pogorelcnik, Anne Berry, et al.
Proceedings of the National Academy of Sciences of the United States of America|December 17, 2009
Network analyses structure genetic diversity in independent genetic worldsSébastien Halary, Jessica W Leigh, Bachar Cheaib, et al.
Genome Biology and Evolution|February 9, 2018
Microbial Dark Matter Investigations: How Microbial Studies Transform Biological Knowledge and Empirically Sketch a Logic of Scientific DiscoveryGuillaume Bernard, Jananan S Pathmanathan, Romain Lannes, et al.
Environmental Microbiology|August 4, 2016
Bipartite graph analyses reveal interdomain LGT involving ultrasmall prokaryotes and their divergent, membrane-related proteinsAlexander L Jaffe, Eduardo Corel, Jananan Sylvestre Pathmanathan, et al.
Gene|July 28, 2005
Evolutionary plasticity of methionine biosynthesisUri Gophna, Eric Bapteste, W Ford Doolittle, et al.
Molecular Biology and Evolution|January 17, 2023
Interactomics: Dozens of Viruses, Co-evolving With Humans, Including the Influenza A Virus, may Actively Distort Human AgingJérôme Teulière, Charles Bernard, Hugo Bonnefous, et al.
Molecular Biology and Evolution|May 14, 2013
Sequence comparative analysis using networks: software for evaluating de novo transcript assembly from next-generation sequencingIan Misner, Cédric Bicep, Philippe Lopez, et al.
Molecular Biology and Evolution|October 18, 2021
Aging at Evolutionary Crossroads: Longitudinal Gene Co-expression Network Analyses of Proximal and Ultimate Causes of Aging in BatsGuillaume Bernard, Jérôme Teulière, Philippe Lopez, et al.
Proceedings of the National Academy of Sciences of the United States of America|October 21, 2004
The timing of eukaryotic evolution: does a relaxed molecular clock reconcile proteins and fossils?Emmanuel J P Douzery, Elizabeth A Snell, Eric Bapteste, et al.
Genome Biology and Evolution|September 25, 2018
MultiTwin: A Software Suite to Analyze Evolution at Multiple Levels of Organization Using Multipartite GraphsEduardo Corel, Jananan S Pathmanathan, Andrew K Watson, et al.
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