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Biophysical Journal|April 5, 2005
The emergence of scaling in sequence-based physical models of protein evolutionEric J Deeds, Eugene I ShakhnovichAdvances in Enzymology and Related Areas of Molecular Biology|November 28, 2006
A structure-centric view of protein evolution, design, and adaptationEric J Deeds, Eugene I ShakhnovichPhysical Review Letters|October 4, 2003
Equilibrium distribution of mutators in the single fitness peak modelEmmanuel Tannenbaum, Eric J Deeds, Eugene I ShakhnovichGenome Research|March 3, 2005
Prokaryotic phylogenies inferred from protein structural domainsEric J Deeds, Hooman Hennessey, Eugene I ShakhnovichJournal of Molecular Biology|April 21, 2004
Proteomic traces of speciationEric J Deeds, Boris Shakhnovich, Eugene I ShakhnovichProceedings of the National Academy of Sciences of the United States of America|December 31, 2005
A simple physical model for scaling in protein-protein interaction networksEric J Deeds, Orr Ashenberg, Eugene I ShakhnovichPhysical Review. E, Statistical, Nonlinear, and Soft Matter Physics|July 13, 2004
Semiconservative replication in the quasispecies modelEmmanuel Tannenbaum, Eric J Deeds, Eugene I ShakhnovichProceedings of the National Academy of Sciences of the United States of America|November 11, 2006
Understanding ensemble protein folding at atomic detailIsaac A Hubner, Eric J Deeds, Eugene I ShakhnovichBiophysical Journal|October 29, 2003
Protein evolution within a structural spaceEric J Deeds, Nikolay V Dokholyan, Eugene I ShakhnovichProceedings of the National Academy of Sciences of the United States of America|December 21, 2005
High-resolution protein folding with a transferable potentialIsaac A Hubner, Eric J Deeds, Eugene I ShakhnovichPageof 23