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Algorithms for Molecular Biology : AMB|October 31, 2009
iTriplet, a rule-based nucleic acid sequence motif finderEric S Ho, Christopher D Jakubowski, Samuel I Gunderson
Genome Biology and Evolution|June 28, 2011
Long conserved fragments upstream of Mammalian polyadenylation sitesEric S Ho, Samuel I Gunderson
BMC Bioinformatics|February 2, 2013
A multispecies polyadenylation site modelEric S Ho, Samuel I Gunderson, Siobain Duffy
Nucleic Acids Research|February 24, 2009
Mutational analysis of a Dcp2-binding element reveals general enhancement of decapping by 5'-end stem-loop structuresYou Li, Eric S Ho, Samuel I Gunderson, et al.
RNA (New York, N.Y.)|October 19, 2007
A bipartite U1 site represses U1A expression by synergizing with PIE to inhibit nuclear polyadenylationFei Guan, Rose M Caratozzolo, Rafal Goraczniak, et al.
The Journal of Biological Chemistry|November 29, 2007
The regulatory element in the 3'-untranslated region of human papillomavirus 16 inhibits expression by binding CUG-binding protein 1Rafal Goraczniak, Samuel I Gunderson
Molecular and Cellular Biology|July 1, 2004
U1A inhibits cleavage at the immunoglobulin M heavy-chain secretory poly(A) site by binding between the two downstream GU-rich regionsCatherine Phillips, Niseema Pachikara, Samuel I Gunderson
RNA (New York, N.Y.)|December 24, 2005
Non-snRNP U1A levels decrease during mammalian B-cell differentiation and release the IgM secretory poly(A) site from repressionJianglin Ma, Samuel I Gunderson, Catherine Phillips
Nature Biotechnology|February 17, 2009
Gene silencing by synthetic U1 adaptorsRafal Goraczniak, Mark A Behlke, Samuel I Gunderson
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