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Plos Computational Biology|July 17, 2026
PumpKin: A machine-learning pipeline for automatically tracking localized kinematics in freely moving C. elegansErin Shappell, Debra Buggs, Jennah Walcott, et al.
Biorxiv : the Preprint Server for Biology|July 16, 2025
EZ-FRCNN: A Fast, Accessible and Robust Deep Learning Package for Object Detection Applications from Ethology to Cell BiologyErin Shappell, Jacob M Wheelock, Guillaume Aubry, et al.
Analytical Chemistry|January 27, 2026
A Facile Method Based on Faster R-CNN for Cell Detection in Microfluidic DevicesGuillaume Aubry, Yanjun Zhao, Erin Shappell, et al.
Annual Review of Analytical Chemistry (Palo Alto, Calif.)|June 13, 2018
Recent Advances and Trends in Microfluidic Platforms for C. elegans Biological AssaysFarhan Kamili, Hang Lu
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