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Biophysical Journal|July 10, 2012
A comparison of genotype-phenotype maps for RNA and proteinsEvandro Ferrada, Andreas WagnerPlos One|December 15, 2010
Evolutionary innovations and the organization of protein functions in genotype spaceEvandro Ferrada, Andreas WagnerProceedings. Biological Sciences|April 24, 2008
Protein robustness promotes evolutionary innovations on large evolutionary time-scalesEvandro Ferrada, Andreas WagnerNature|June 4, 2011
Cryptic genetic variation promotes rapid evolutionary adaptation in an RNA enzymeEric J Hayden, Evandro Ferrada, Andreas WagnerGenome Biology and Evolution|April 9, 2013
Growth temperature and genome size in bacteria are negatively correlated, suggesting genomic streamlining during thermal adaptationNiv Sabath, Evandro Ferrada, Aditya Barve, et al.Journal of Molecular Evolution|December 7, 2013
The effects of stabilizing and directional selection on phenotypic and genotypic variation in a population of RNA enzymesEric J Hayden, Sinisa Bratulic, Iwo Koenig, et al.Plos Computational Biology|December 5, 2014
The amino acid alphabet and the architecture of the protein sequence-structure map. I. Binary alphabetsEvandro FerradaJournal of Molecular Evolution|May 2, 2021
Quantifying the Mutational Robustness of Protein-Coding GenesEvandro FerradaEvolutionary Bioinformatics Online|August 28, 2019
Gene Families, Epistasis and the Amino Acid Preferences of Protein HomologsEvandro FerradaGenome Biology and Evolution|November 30, 2018
The Site-Specific Amino Acid Preferences of Homologous Proteins Depend on Sequence DivergenceEvandro FerradaPageof 35