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Bioinformatics (Oxford, England)|July 22, 2026
SignifiKANTE: Efficient P-value computation for gene regulatory networksFabian Woller, Paul Martini, Souptik Sen, et al.Bioinformatics (Oxford, England)|July 15, 2025
Deep learning models for unbiased sequence-based PPI prediction plateau at an accuracy of 0.65Timo Reim, Anne Hartebrodt, David B Blumenthal, et al.Gigascience|November 9, 2025
NApy: efficient statistics in Python for large-scale heterogeneous data with enhanced support for missing dataFabian Woller, Lis Arend, Christian Fuchsberger, et al.NPJ Systems Biology and Applications|December 2, 2024
Spatial cell graph analysis reveals skin tissue organization characteristic for cutaneous T cell lymphomaSuryadipto Sarkar, Anna Möller, Anne Hartebrodt, et al.Bioinformatics Advances|January 26, 2023
Federated horizontally partitioned principal component analysis for biomedical applicationsAnne Hartebrodt, Richard RöttgerMethods in Molecular Biology (Clifton, N.J.)|October 5, 2019
De Novo Pathway Enrichment with KeyPathwayMinerNicolas Alcaraz, Anne Hartebrodt, Markus ListHemasphere|August 14, 2025
3D Tumor microenvironment interaction reveals AP-1 complex regulation and contact-mediated reprogramming of bone marrow stromal cells in chronic lymphocytic leukemiaJana Lindacher, Anne Hartebrodt, Janin Dingfelder, et al.Briefings in Bioinformatics|November 20, 2023
Demographic confounders distort inference of gene regulatory and gene co-expression networks in cancerAnna Ketteler, David B BlumenthalBriefings in Bioinformatics|March 6, 2024
Cracking the black box of deep sequence-based protein-protein interaction predictionJudith Bernett, David B Blumenthal, Markus ListNature Communications|April 8, 2025
Data splitting to avoid information leakage with DataSAILRoman Joeres, David B Blumenthal, Olga V KalininaPageof 7