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Bioinformatics (Oxford, England)|March 2, 2026
Dogme: A nextflow pipeline for reprocessing nanopore RNA and DNA modificationsElnaz Abdollahzadeh, Ali MortazaviACS Omega|August 5, 2024
A Numerical Study of Fault Reactivation Mechanisms in CO2 StorageAli Mortazavi, Torekeldi MaratovBioinformatics (Oxford, England)|June 19, 2018
TranscriptClean: variant-aware correction of indels, mismatches and splice junctions in long-read transcriptsDana Wyman, Ali MortazaviBMC Systems Biology|July 18, 2014
The common ground of genomics and systems biologyAna Conesa, Ali MortazaviPlos One|December 9, 2024
Evaluation of Monascus purpureus fermentation in dairy sludge-based medium for enhanced production of vibrant red pigment with minimal citrinin contentSamira Moradi, Seyed Ali MortazaviJournal of Visualized Experiments : Jove|June 14, 2021
A Bioinformatics Pipeline for Investigating Molecular Evolution and Gene Expression using RNA-seqAide Macias-Muñoz, Ali MortazaviTexas Heart Institute Journal|October 23, 2008
A modified technique for carotid cannulation via the transfemoral approach, during angioplasty and stent placementKamal Gupta, Mazda Biria, Ali MortazaviBioinformatics (Oxford, England)|July 3, 2023
PyWGCNA: a Python package for weighted gene co-expression network analysisNarges Rezaie, Farilie Reese, Ali MortazaviBiomechanics and Modeling in Mechanobiology|October 7, 2024
Towards a framework for predicting immunotherapy outcome: a hybrid multiscale mathematical model of immune response to vascular tumor growthSayyed Mohammad Ali Mortazavi, Bahar FiroozabadiComputer Methods and Programs in Biomedicine|May 15, 2026
Antiangiogenic therapy enhances CAR-T cell efficacy in solid tumors: Insights from a hybrid multiscale modelSayyed Mohammad Ali Mortazavi, Bahar FiroozabadiPageof 21